X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;f=ctest%2F1dkz_cut_unres.pdb;fp=ctest%2F1dkz_cut_unres.pdb;h=19f136bd5e343962a0138d45b2238c2e3e908de5;hb=6d74bfa38307157b15037b211b6537fd77bbbf88;hp=0000000000000000000000000000000000000000;hpb=f526ba33b22b25a96070192e51b6f1943fb3ba3c;p=unres.git diff --git a/ctest/1dkz_cut_unres.pdb b/ctest/1dkz_cut_unres.pdb new file mode 100644 index 0000000..19f136b --- /dev/null +++ b/ctest/1dkz_cut_unres.pdb @@ -0,0 +1,277 @@ +REMARK 1DKZ 1st domain with substrate ENERGY -3.32121E+02 +SHEET 1 B1 2 VAL 37 THR 40 0 +SHEET 2 B1 2 ASN 85 LEU 88 1 N ASN 85 O VAL 37 +SHEET 1 B2 2 ASP 5 THR 7 0 +SHEET 2 B2 2 THR 28 ILE 30 -1 N ILE 30 O ASP 5 +SHEET 1 B3 2 LEU 9 LEU 11 0 +SHEET 2 B3 2 ALA 25 ASN 27 -1 N ASN 27 O LEU 9 +SHEET 1 B4 2 SER 10 GLU 14 0 +SHEET 2 B4 2 HIS 51 GLY 55 -1 N GLY 55 O SER 10 +SHEET 1 B5 2 GLY 12 THR 15 0 +SHEET 2 B5 2 VAL 19 THR 22 -1 N THR 22 O GLY 12 +SHEET 1 B6 2 SER 46 HIS 51 0 +SHEET 2 B6 2 GLN 68 GLY 73 -1 N GLY 73 O SER 46 +ATOM 1 CA VAL A 1 -1.453 -1.710 -3.275 0.000 +ATOM 2 CB VAL A 1 -2.904 -1.873 -3.572 0.000 +ATOM 3 CA LEU A 2 -0.107 -2.245 -6.784 0.000 +ATOM 4 CB LEU A 2 1.932 -1.838 -6.677 0.000 +ATOM 5 CA LEU A 3 -3.268 -4.155 -7.656 0.000 +ATOM 6 CB LEU A 3 -3.198 -5.880 -8.109 0.000 +ATOM 7 CA LEU A 4 -5.271 -0.916 -7.604 0.000 +ATOM 8 CB LEU A 4 -5.656 1.061 -7.097 0.000 +ATOM 9 CA ASP A 5 -7.662 -2.034 -10.362 0.000 +ATOM 10 CB ASP A 5 -7.037 -3.950 -10.134 0.000 +ATOM 11 CA VAL A 6 -10.077 0.814 -9.307 0.000 +ATOM 12 CB VAL A 6 -9.960 2.239 -8.912 0.000 +ATOM 13 CA THR A 7 -13.459 0.219 -10.944 0.000 +ATOM 14 CB THR A 7 -14.046 -0.472 -9.773 0.000 +ATOM 15 CA PRO A 8 -15.282 3.599 -11.068 0.000 +ATOM 16 CB PRO A 8 -13.959 3.984 -11.417 0.000 +ATOM 17 CA LEU A 9 -18.745 4.063 -12.558 0.000 +ATOM 18 CB LEU A 9 -19.601 3.660 -14.415 0.000 +ATOM 19 CA SER A 10 -20.656 1.052 -11.302 0.000 +ATOM 20 CB SER A 10 -21.314 0.405 -12.234 0.000 +ATOM 21 CA LEU A 11 -17.815 -1.126 -12.705 0.000 +ATOM 22 CB LEU A 11 -16.385 0.030 -13.685 0.000 +ATOM 23 CA GLY A 12 -19.262 -4.650 -12.963 0.000 +ATOM 24 CA ILE A 13 -18.391 -8.425 -13.473 0.000 +ATOM 25 CB ILE A 13 -18.483 -9.591 -11.966 0.000 +ATOM 26 CA GLU A 14 -19.687 -8.923 -17.105 0.000 +ATOM 27 CB GLU A 14 -18.340 -10.472 -18.983 0.000 +ATOM 28 CA THR A 15 -20.450 -12.604 -16.684 0.000 +ATOM 29 CB THR A 15 -20.554 -12.534 -15.219 0.000 +ATOM 30 CA MET A 16 -23.404 -14.645 -17.910 0.000 +ATOM 31 CB MET A 16 -24.566 -16.674 -17.032 0.000 +ATOM 32 CA GLY A 17 -21.668 -14.295 -21.258 0.000 +ATOM 33 CA GLY A 18 -22.155 -10.509 -20.998 0.000 +ATOM 34 CA VAL A 19 -25.091 -10.548 -18.438 0.000 +ATOM 35 CB VAL A 19 -25.950 -11.732 -18.703 0.000 +ATOM 36 CA MET A 20 -23.745 -8.842 -15.255 0.000 +ATOM 37 CB MET A 20 -22.472 -6.734 -15.609 0.000 +ATOM 38 CA THR A 21 -22.686 -8.793 -11.555 0.000 +ATOM 39 CB THR A 21 -22.618 -10.148 -10.972 0.000 +ATOM 40 CA THR A 22 -21.077 -6.212 -9.188 0.000 +ATOM 41 CB THR A 22 -21.516 -4.876 -8.740 0.000 +ATOM 42 CA LEU A 23 -17.760 -7.660 -7.965 0.000 +ATOM 43 CB LEU A 23 -16.625 -9.139 -7.023 0.000 +ATOM 44 CA ILE A 24 -15.657 -4.736 -9.079 0.000 +ATOM 45 CB ILE A 24 -15.527 -4.499 -10.963 0.000 +ATOM 46 CA ALA A 25 -18.036 -2.240 -7.442 0.000 +ATOM 47 CB ALA A 25 -18.289 -2.455 -6.742 0.000 +ATOM 48 CA LYS A 26 -19.778 1.149 -7.325 0.000 +ATOM 49 CB LYS A 26 -22.728 0.437 -7.805 0.000 +ATOM 50 CA ASN A 27 -16.671 3.274 -6.958 0.000 +ATOM 51 CB ASN A 27 -15.548 4.883 -7.380 0.000 +ATOM 52 CA THR A 28 -14.496 0.454 -5.530 0.000 +ATOM 53 CB THR A 28 -15.474 -0.131 -4.589 0.000 +ATOM 54 CA THR A 29 -11.322 -1.538 -6.081 0.000 +ATOM 55 CB THR A 29 -10.022 -1.223 -5.448 0.000 +ATOM 56 CA ILE A 30 -11.172 -4.710 -8.240 0.000 +ATOM 57 CB ILE A 30 -11.150 -4.404 -10.140 0.000 +ATOM 58 CA PRO A 31 -8.842 -5.660 -5.216 0.000 +ATOM 59 CB PRO A 31 -7.851 -4.814 -5.790 0.000 +ATOM 60 CA THR A 32 -12.097 -5.207 -3.198 0.000 +ATOM 61 CB THR A 32 -13.172 -4.531 -3.964 0.000 +ATOM 62 CA LYS A 33 -13.053 -8.439 -5.081 0.000 +ATOM 63 CB LYS A 33 -10.875 -8.766 -7.235 0.000 +ATOM 64 CA HIS A 34 -16.226 -8.899 -2.914 0.000 +ATOM 65 CB HIS A 34 -17.141 -6.324 -3.062 0.000 +ATOM 66 CA SER A 35 -18.237 -11.906 -4.123 0.000 +ATOM 67 CB SER A 35 -18.134 -13.087 -4.686 0.000 +ATOM 68 CA GLN A 36 -21.198 -11.226 -1.735 0.000 +ATOM 69 CB GLN A 36 -20.795 -8.511 -2.143 0.000 +ATOM 70 CA VAL A 37 -22.758 -14.350 -3.187 0.000 +ATOM 71 CB VAL A 37 -23.605 -15.558 -3.005 0.000 +ATOM 72 CA PHE A 38 -21.893 -13.501 -6.816 0.000 +ATOM 73 CB PHE A 38 -21.412 -10.578 -6.429 0.000 +ATOM 74 CA SER A 39 -22.390 -17.177 -7.720 0.000 +ATOM 75 CB SER A 39 -23.505 -17.837 -7.527 0.000 +ATOM 76 CA THR A 40 -21.045 -19.809 -10.081 0.000 +ATOM 77 CB THR A 40 -20.723 -21.059 -9.363 0.000 +ATOM 78 CA ALA A 41 -23.574 -20.063 -12.895 0.000 +ATOM 79 CB ALA A 41 -23.498 -19.324 -13.132 0.000 +ATOM 80 CA GLU A 42 -23.421 -23.316 -14.816 0.000 +ATOM 81 CB GLU A 42 -23.169 -22.004 -16.482 0.000 +ATOM 82 CA ASP A 43 -24.155 -26.995 -14.326 0.000 +ATOM 83 CB ASP A 43 -25.390 -28.601 -14.445 0.000 +ATOM 84 CA ASN A 44 -21.288 -27.257 -11.865 0.000 +ATOM 85 CB ASN A 44 -19.958 -28.582 -12.574 0.000 +ATOM 86 CA GLN A 45 -19.028 -24.534 -13.403 0.000 +ATOM 87 CB GLN A 45 -19.696 -21.842 -13.289 0.000 +ATOM 88 CA SER A 46 -17.011 -23.508 -10.334 0.000 +ATOM 89 CB SER A 46 -16.822 -23.597 -9.041 0.000 +ATOM 90 CA ALA A 47 -14.161 -22.148 -12.477 0.000 +ATOM 91 CB ALA A 47 -14.222 -22.407 -13.206 0.000 +ATOM 92 CA VAL A 48 -16.358 -19.032 -12.966 0.000 +ATOM 93 CB VAL A 48 -16.826 -18.904 -11.565 0.000 +ATOM 94 CA SER A 49 -14.833 -17.081 -15.949 0.000 +ATOM 95 CB SER A 49 -15.138 -17.536 -17.139 0.000 +ATOM 96 CA ILE A 50 -16.196 -13.533 -16.524 0.000 +ATOM 97 CB ILE A 50 -16.393 -13.508 -14.896 0.000 +ATOM 98 CA HIS A 51 -15.259 -10.067 -17.944 0.000 +ATOM 99 CB HIS A 51 -14.140 -8.537 -19.915 0.000 +ATOM 100 CA VAL A 52 -14.566 -7.213 -15.436 0.000 +ATOM 101 CB VAL A 52 -13.101 -7.162 -15.152 0.000 +ATOM 102 CA LEU A 53 -16.880 -4.450 -16.967 0.000 +ATOM 103 CB LEU A 53 -18.061 -5.511 -18.314 0.000 +ATOM 104 CA GLN A 54 -17.660 -0.720 -17.313 0.000 +ATOM 105 CB GLN A 54 -17.092 1.929 -17.917 0.000 +ATOM 106 CA GLY A 55 -21.381 -0.616 -16.418 0.000 +ATOM 107 CA GLU A 56 -23.697 -2.941 -14.427 0.000 +ATOM 108 CB GLU A 56 -24.024 -3.885 -12.551 0.000 +ATOM 109 CA ARG A 57 -26.365 -4.272 -16.832 0.000 +ATOM 110 CB ARG A 57 -24.498 -2.067 -18.680 0.000 +ATOM 111 CA LYS A 58 -27.970 -7.094 -18.812 0.000 +ATOM 112 CB LYS A 58 -28.763 -8.962 -17.025 0.000 +ATOM 113 CA ARG A 59 -26.085 -6.142 -21.980 0.000 +ATOM 114 CB ARG A 59 -27.098 -4.531 -24.830 0.000 +ATOM 115 CA ALA A 60 -22.946 -5.294 -19.961 0.000 +ATOM 116 CB ALA A 60 -22.942 -6.026 -19.693 0.000 +ATOM 117 CA ALA A 61 -21.096 -6.516 -23.015 0.000 +ATOM 118 CB ALA A 61 -20.822 -7.204 -23.250 0.000 +ATOM 119 CA ASP A 62 -22.413 -3.298 -24.631 0.000 +ATOM 120 CB ASP A 62 -23.736 -2.987 -23.122 0.000 +ATOM 121 CA ASN A 63 -20.130 -1.329 -22.308 0.000 +ATOM 122 CB ASN A 63 -20.501 -2.163 -20.519 0.000 +ATOM 123 CA LYS A 64 -16.399 -1.126 -21.591 0.000 +ATOM 124 CB LYS A 64 -14.327 0.039 -20.297 0.000 +ATOM 125 CA SER A 65 -15.504 -4.847 -21.005 0.000 +ATOM 126 CB SER A 65 -15.876 -5.228 -22.203 0.000 +ATOM 127 CA LEU A 66 -12.126 -4.616 -19.183 0.000 +ATOM 128 CB LEU A 66 -12.711 -3.350 -17.630 0.000 +ATOM 129 CA GLY A 67 -10.371 -7.975 -18.688 0.000 +ATOM 130 CA GLN A 68 -11.098 -11.227 -16.806 0.000 +ATOM 131 CB GLN A 68 -11.795 -13.905 -17.010 0.000 +ATOM 132 CA PHE A 69 -12.783 -12.134 -13.477 0.000 +ATOM 133 CB PHE A 69 -13.267 -9.980 -11.459 0.000 +ATOM 134 CA ASN A 70 -11.735 -15.827 -13.363 0.000 +ATOM 135 CB ASN A 70 -10.770 -17.575 -13.517 0.000 +ATOM 136 CA LEU A 71 -13.694 -16.622 -10.146 0.000 +ATOM 137 CB LEU A 71 -14.731 -15.230 -8.982 0.000 +ATOM 138 CA ASP A 72 -12.151 -20.050 -9.315 0.000 +ATOM 139 CB ASP A 72 -10.253 -19.574 -9.845 0.000 +ATOM 140 CA GLY A 73 -14.470 -20.732 -6.339 0.000 +ATOM 141 CA ILE A 74 -18.265 -20.688 -5.620 0.000 +ATOM 142 CB ILE A 74 -19.069 -18.955 -5.565 0.000 +ATOM 143 CA ASN A 75 -20.642 -23.661 -5.571 0.000 +ATOM 144 CB ASN A 75 -20.174 -24.194 -3.695 0.000 +ATOM 145 CA PRO A 76 -22.944 -24.799 -8.392 0.000 +ATOM 146 CB PRO A 76 -22.699 -25.996 -7.666 0.000 +ATOM 147 CA ALA A 77 -26.095 -22.868 -9.184 0.000 +ATOM 148 CB ALA A 77 -25.839 -22.134 -9.095 0.000 +ATOM 149 CA PRO A 78 -28.813 -22.490 -11.812 0.000 +ATOM 150 CB PRO A 78 -29.557 -23.176 -10.813 0.000 +ATOM 151 CA ARG A 79 -27.722 -18.929 -12.407 0.000 +ATOM 152 CB ARG A 79 -28.049 -16.171 -14.385 0.000 +ATOM 153 CA GLY A 80 -27.848 -18.193 -8.638 0.000 +ATOM 154 CA MET A 81 -26.917 -19.675 -5.247 0.000 +ATOM 155 CB MET A 81 -28.120 -21.363 -5.688 0.000 +ATOM 156 CA PRO A 82 -23.544 -20.636 -3.689 0.000 +ATOM 157 CB PRO A 82 -23.406 -21.224 -4.976 0.000 +ATOM 158 CA GLN A 83 -20.719 -18.825 -1.892 0.000 +ATOM 159 CB GLN A 83 -19.546 -16.326 -1.595 0.000 +TER +ATOM 160 CA ASN B 1 -27.604 -13.231 -5.657 0.000 +ATOM 161 CB ASN B 1 -29.388 -12.377 -5.991 0.000 +ATOM 162 CA ARG B 2 -25.919 -12.951 -9.077 0.000 +ATOM 163 CB ARG B 2 -26.217 -10.466 -11.431 0.000 +ATOM 164 CA LEU B 3 -24.068 -15.184 -11.618 0.000 +ATOM 165 CB LEU B 3 -24.504 -13.935 -13.223 0.000 +ATOM 166 CA LEU B 4 -20.316 -15.681 -12.429 0.000 +ATOM 167 CB LEU B 4 -19.867 -15.354 -10.418 0.000 +ATOM 168 CA LEU B 5 -20.397 -17.985 -15.523 0.000 +ATOM 169 CB LEU B 5 -19.741 -16.763 -17.079 0.000 +ATOM 170 CA THR B 6 -18.507 -20.799 -17.405 0.000 +ATOM 171 CB THR B 6 -19.135 -22.129 -17.204 0.000 +ATOM 172 CA GLY B 7 -17.462 -18.963 -20.609 0.000 +TER +CONECT 1 3 2 +CONECT 3 5 4 +CONECT 5 7 6 +CONECT 7 9 8 +CONECT 9 11 10 +CONECT 11 13 12 +CONECT 13 15 14 +CONECT 15 17 16 +CONECT 17 19 18 +CONECT 19 21 20 +CONECT 21 23 22 +CONECT 23 24 +CONECT 24 26 25 +CONECT 26 28 27 +CONECT 28 30 29 +CONECT 30 32 31 +CONECT 32 33 +CONECT 33 34 +CONECT 34 36 35 +CONECT 36 38 37 +CONECT 38 40 39 +CONECT 40 42 41 +CONECT 42 44 43 +CONECT 44 46 45 +CONECT 46 48 47 +CONECT 48 50 49 +CONECT 50 52 51 +CONECT 52 54 53 +CONECT 54 56 55 +CONECT 56 58 57 +CONECT 58 60 59 +CONECT 60 62 61 +CONECT 62 64 63 +CONECT 64 66 65 +CONECT 66 68 67 +CONECT 68 70 69 +CONECT 70 72 71 +CONECT 72 74 73 +CONECT 74 76 75 +CONECT 76 78 77 +CONECT 78 80 79 +CONECT 80 82 81 +CONECT 82 84 83 +CONECT 84 86 85 +CONECT 86 88 87 +CONECT 88 90 89 +CONECT 90 92 91 +CONECT 92 94 93 +CONECT 94 96 95 +CONECT 96 98 97 +CONECT 98 100 99 +CONECT 100 102 101 +CONECT 102 104 103 +CONECT 104 106 105 +CONECT 106 107 +CONECT 107 109 108 +CONECT 109 111 110 +CONECT 111 113 112 +CONECT 113 115 114 +CONECT 115 117 116 +CONECT 117 119 118 +CONECT 119 121 120 +CONECT 121 123 122 +CONECT 123 125 124 +CONECT 125 127 126 +CONECT 127 129 128 +CONECT 129 130 +CONECT 130 132 131 +CONECT 132 134 133 +CONECT 134 136 135 +CONECT 136 138 137 +CONECT 138 140 139 +CONECT 140 141 +CONECT 141 143 142 +CONECT 143 145 144 +CONECT 145 147 146 +CONECT 147 149 148 +CONECT 149 151 150 +CONECT 151 153 152 +CONECT 153 154 +CONECT 154 156 155 +CONECT 156 158 157 +CONECT 158 159 +CONECT 160 162 161 +CONECT 162 164 163 +CONECT 164 166 165 +CONECT 166 168 167 +CONECT 168 170 169 +CONECT 170 172 171 +ENDMDL