X-Git-Url: http://mmka.chem.univ.gda.pl/gitweb/?a=blobdiff_plain;ds=sidebyside;f=source%2Funres%2Fsrc_MD%2Fintcartderiv.F;h=e3ae39de3baafae401e95e5d72a146e35bacda37;hb=bdca888f15f307eb56c89e9dfedd2d92f017a504;hp=c22054007e6da27e700a4de033e76349bb2e2cd7;hpb=4866688f3356059b9a933ec2be6da24e6784fa9f;p=unres.git diff --git a/source/unres/src_MD/intcartderiv.F b/source/unres/src_MD/intcartderiv.F index c220540..e3ae39d 100644 --- a/source/unres/src_MD/intcartderiv.F +++ b/source/unres/src_MD/intcartderiv.F @@ -149,6 +149,11 @@ c Obtaining the gamma derivatives from cosine derivative endif enddo + do i=1,nres-1 + do j=1,3 + dc_norm2(j,i+nres)=-dc_norm(j,i+nres) + enddo + enddo Calculate derivative of Tauangle #ifdef PARINTDER do i=itau_start,itau_end @@ -165,10 +170,10 @@ c the conventional case cost=dcos(theta(i)) cost1=dcos(omicron(2,i-1)) cosg=dcos(tauangle(1,i)) - do j=1,3 - dc_norm2(j,i-2+nres)=-dc_norm(j,i-2+nres) +C do j=1,3 +C dc_norm2(j,i-2+nres)=-dc_norm(j,i-2+nres) cc write(iout,*) dc_norm2(j,i-2+nres),"dcnorm" - enddo +C enddo scalp=scalar(dc_norm2(1,i-2+nres),dc_norm(1,i-1)) fac0=1.0d0/(sint1*sint) fac1=cost*fac0 @@ -194,7 +199,7 @@ c Obtaining the gamma derivatives from sine derivative dsintau(j,1,2,i)= & -sing*(ctgt1*domicron(j,2,1,i-1)+ctgt*dtheta(j,1,i)) & -(fac0*vp2(j)+sing*dc_norm(j,i-2))*vbld_inv(i-1) -c write(iout,*) "dsintau", dsintau(j,1,2,i) +c write(iout,*) "dsintau", dsintau(j,1,1,i),dsintau(j,1,2,i) dtauangle(j,1,2,i)=cosg_inv*dsintau(j,1,2,i) c Bug fixed 3/24/05 (AL) dsintau(j,1,3,i)=-sing*ctgt*dtheta(j,2,i) @@ -221,7 +226,9 @@ c write (iout,*) "else",i enddo endif c do k=1,3 -c write(iout,*) "tu",i,k,(dtauangle(j,1,k,i),j=1,3) +c write(iout,*) "tu",1,i,k,(dtauangle(j,1,k,i),j=1,3) +c write(iout,*) "tu",2,i,k,(dtauangle(j,2,k,i),j=1,3) +c write(iout,*) "tu",3,i,k,(dtauangle(j,3,k,i),j=1,3) c enddo enddo CC Second case Ca...Ca...Ca...SC @@ -313,10 +320,10 @@ c the conventional case cost=dcos(omicron(1,i)) cost1=dcos(omicron(2,i-1)) cosg=dcos(tauangle(3,i)) - do j=1,3 - dc_norm2(j,i-2+nres)=-dc_norm(j,i-2+nres) +C do j=1,3 +C dc_norm2(j,i-2+nres)=-dc_norm(j,i-2+nres) c dc_norm2(j,i-1+nres)=-dc_norm(j,i-1+nres) - enddo +C enddo scalp=scalar(dc_norm2(1,i-2+nres),dc_norm(1,i-1+nres)) fac0=1.0d0/(sint1*sint) fac1=cost*fac0