from django import forms
from django.core.validators import RegexValidator
from django.template.defaultfilters import capfirst
-from django.utils.functional import lazy
from pyqcg.utils import TaskStatus
-from qcg.models import Task, Allocation
-
-
-def host_choices():
- return tuple((host, capfirst(host.split('.')[0])) for host in
- Allocation.objects.values_list('host_name', flat=True).order_by('host_name').distinct())
+from qcg.fields import TimeRangeField
+from qcg.models import Task, Allocation, JobTemplate
date_range_validator = RegexValidator(r'[0-9]{2}\.[0-9]{2}\.[0-9]{4} - [0-9]{2}\.[0-9]{2}\.[0-9]{4}')
+nodes_validator = RegexValidator(r'^[0-9]{1,3}:[0-9]{1,2}(:[0-9]{1,2})?$')
+env_name_validator = RegexValidator(r'^[a-zA-Z_][a-zA-Z0-9_]*$')
+
+CHOICES_PLACEHOLDER = (None, '')
class FiltersForm(forms.Form):
}
STATUS_CHOICES_DICT = dict(STATUS_CHOICES)
+ keywords = forms.CharField(max_length=100, label=u"Wyszukaj frazę", required=False)
status = forms.MultipleChoiceField(choices=STATUS_CHOICES, label=u"Status", required=False,
widget=forms.CheckboxSelectMultiple)
- host = forms.MultipleChoiceField(choices=lazy(host_choices, tuple)(), label=u"Host", required=False,
- widget=forms.CheckboxSelectMultiple)
# advanced
- keywords = forms.CharField(max_length=100, label=u"Wyszukaj frazę", required=False)
+ host = forms.MultipleChoiceField(label=u"Host", required=False, widget=forms.CheckboxSelectMultiple)
+ purged = forms.TypedChoiceField(label=u"Istniejący katalog roboczy?", required=False, coerce=lambda x: bool(int(x)),
+ choices=((0, 'Tak'), (1, 'Nie')), widget=forms.RadioSelect)
submission = forms.CharField(label=u"Data zlecenia", validators=[date_range_validator], required=False)
finish = forms.CharField(label=u"Data zakończenia", validators=[date_range_validator], required=False)
+
+ def __init__(self, *args, **kwargs):
+ super(FiltersForm, self).__init__(*args, **kwargs)
+
+ self.fields['host'].choices = tuple(
+ (host, capfirst(host.split('.', 1)[0]))
+ for host in Allocation.objects.values_list('host_name', flat=True).order_by('host_name').distinct())
+
+
+class JobDescriptionForm(forms.Form):
+ class Process(object):
+ NONE = ''
+ CMD = 'c'
+ SCRIPT = 's'
+
+ CHOICES = (
+ (NONE, u'Brak'),
+ (CMD, u'Polecenie'),
+ (SCRIPT, u'Skrypt'),
+ )
+
+
+ APPLICATION_CHOICES = (
+ CHOICES_PLACEHOLDER,
+ ('unres-gab', 'UNRES GAB'),
+ ('unres-e0ll2y', 'UNRES E0LL2Y'),
+ )
+
+
+ QUEUE_CHOICES = (
+ CHOICES_PLACEHOLDER,
+ ('plgrid', 'plgrid'),
+ ('plgrid-long', 'plgrid-long'),
+ ('plgrid-testing', 'plgrid-testing'),
+ )
+
+ PROTOCOL_CHOICES = (
+ ('', u'Brak'),
+ ('mailto', u'E-mail'),
+ ('xmpp', u'XMPP'),
+ )
+
+
+ FORCE_FIELD_CHOICES = (
+ ('GAB', u'GAB'),
+ ('E0LL2Y', u'E0LL2Y'),
+ )
+
+ nstep = forms.IntegerField(label=u"NSTEP", help_text=u"Liczba kroków w trajektorii", min_value=1, initial=500000, required=False)
+ ntwe = forms.IntegerField(label=u"NTWE", help_text=u"Częstość zapisu energii w krokach", min_value=0, initial=100, required=False)
+ ntwx = forms.IntegerField(label=u"NTWX", help_text=u"Częstość zapisu współrzędnych w krokach", min_value=0, initial=1000, required=False)
+ dt = forms.DecimalField(label=u"DT", help_text=u"Krok czasowy. Wartość kroku równa jedności to 48.9 fs", max_digits=5, decimal_places=2, min_value=0.01, initial=0.1, required=False)
+ damax = forms.DecimalField(label=u"DAMAX", help_text=u"Maksymalna dopuszczalna zmiana przyspieszenia podczas jednego kroku czasowego", max_digits=5, decimal_places=2, min_value=0.01, initial=1.0, required=False)
+ force_field = forms.ChoiceField(choices=FORCE_FIELD_CHOICES, label=u"Pole siłowe", required=False, initial='GAB')
+
+ pdb_file = forms.CharField(label=u"Plik PDB", max_length=500, required=False)
+ #retmin = forms.IntegerField(label=u"RETMIN", help_text=u"Dolny zakres temparatur dla wymiany replik", min_value=2, initial=250, required=False)
+ #retmax = forms.IntegerField(label=u"RETMAX", help_text=u"Górny zakres temperatur dla wymiany replik", min_value=2, initial=450, required=False)
+ sequence = forms.CharField(label=u"Sekwencja", help_text=u"Sekwencja aminokwasów w zapisie jednoliterowym", widget=forms.Textarea(attrs={'rows': 2, 'cols': 40}), required=False)
+
+
+ application = forms.ChoiceField(choices=APPLICATION_CHOICES, label=u"Aplikacja", required=False, initial='unres-gab')
+ #master_file = forms.CharField(label=u"Plik główny", max_length=500, required=False)
+
+ executable = forms.CharField(label=u"Plik wykonywalny", max_length=500, required=False)
+ script = forms.CharField(label=u"Skrypt", widget=forms.Textarea(attrs={'rows': 2, 'cols': 40}), required=False)
+ arguments = forms.MultipleChoiceField(label=u"Argumenty", required=False)
+ note = forms.CharField(label=u"Opis", widget=forms.Textarea(attrs={'rows': 2, 'cols': 40}), required=False)
+ grant = forms.CharField(label=u"Grant", max_length=100, required=False)
+
+ hosts = forms.MultipleChoiceField(label=u"Host", required=False)
+ properties = forms.CharField(label=u"Właściwości węzłów", required=False)
+ queue = forms.ChoiceField(choices=QUEUE_CHOICES, label=u"Kolejka", required=False)
+ procs = forms.IntegerField(label=u"Liczba procesów", min_value=0, required=False)
+ nodes = forms.CharField(label=u"Topologia węzłów", max_length=10, validators=[nodes_validator], required=False)
+ wall_time = TimeRangeField(label=u"Wall time", required=False)
+ memory = forms.IntegerField(label=u"Pamięć (MB)", min_value=0, required=False)
+ memory_per_slot = forms.IntegerField(label=u"Pamięci per proces (MB)", min_value=0, required=False)
+ modules = forms.MultipleChoiceField(label=u"Moduły", required=False)
+ reservation = forms.CharField(label=u"Rezerwacja", max_length=100, required=False)
+
+ input = forms.CharField(label=u"Standardowe wejście", max_length=500, required=False)
+ stage_in = forms.MultipleChoiceField(label=u"Stage in", required=False)
+
+ monitoring = forms.BooleanField(label=u"Portal QCG-Monitoring", required=False)
+ notify_type = forms.ChoiceField(label=u"Monitorowanie stanu", choices=PROTOCOL_CHOICES, required=False, initial='',
+ widget=forms.RadioSelect)
+ notify_address = forms.EmailField(label=u"Adres", required=False)
+ watch_output_type = forms.ChoiceField(label=u"Monitorowanie wyjścia", choices=PROTOCOL_CHOICES, required=False,
+ initial='', widget=forms.RadioSelect)
+ watch_output_address = forms.EmailField(label=u"Adres", required=False)
+ watch_output_pattern = forms.CharField(label=u"Wzorzec", max_length=500, required=False)
+
+ preprocess_type = forms.ChoiceField(label=u"Preprocessing", choices=Process.CHOICES, required=False,
+ initial=Process.NONE, widget=forms.RadioSelect)
+ preprocess_cmd = forms.CharField(label=u"Polecenie", max_length=1000, required=False)
+ preprocess_script = forms.CharField(label=u"Skrypt", max_length=500, required=False)
+ postprocess_type = forms.ChoiceField(label=u"Postprocessing", choices=Process.CHOICES, required=False,
+ initial=Process.NONE, widget=forms.RadioSelect)
+ postprocess_cmd = forms.CharField(label=u"Polecenie", max_length=1000, required=False)
+ postprocess_script = forms.CharField(label=u"Skrypt", max_length=500, required=False)
+ native = forms.MultipleChoiceField(label=u"Opcje systemu kolejkowego", required=False)
+ persistent = forms.BooleanField(label=u"Trwałe", required=False)
+
+ def __init__(self, data=None, initial=None, hosts=(), applications=(), modules=(), *args, **kwargs):
+ super(JobDescriptionForm, self).__init__(data, initial=initial, *args, **kwargs)
+
+ self.fields['hosts'].choices = hosts
+ self.fields['application'].choices = applications
+ self.fields['modules'].choices = modules
+
+ if data or initial:
+ self._init_user_choices('queue')
+ self._init_user_choices('arguments')
+ self._init_user_choices('native')
+ self._init_user_choices('stage_in')
+ self._init_user_choices('force_field')
+
+ if not hosts:
+ self._init_user_choices('hosts')
+ self._init_user_choices('application')
+ self._init_user_choices('modules')
+
+
+ self.fields['monitoring'].widget.attrs['disabled'] = True
+
+ def clean(self):
+ data = super(JobDescriptionForm, self).clean()
+
+ force_field = data.get('force_field')
+
+ if force_field == u'GAB':
+ data['application'] = [u'unres-gab']
+ else:
+ data['application'] = [u'unres-e0ll2y']
+
+ if data['pdb_file']== None:
+ self.add_error('pdb_file', u"Należy podać plik PDB.")
+
+ if data['sequence']== '':
+ self.add_error('sequence', u"Należy podać sekwencję aminokwasów.")
+
+ if data['procs'] and data['nodes']:
+ self.add_error(None, u"Zdefiniuj tylko jedno z pól: liczbę procesów lub topologię węzłów")
+
+ notify_type = data.get('notify_type')
+ data['notify'] = u'{}:{}'.format(notify_type, data['notify_address']) if notify_type else ''
+
+ wo_type = data.get('watch_output_type')
+ data['watch_output'] = u'{}:{}'.format(wo_type, data['watch_output_address']) if wo_type else ''
+
+ preprocess_type = data.get('preprocess_type')
+ if preprocess_type == self.Process.CMD:
+ data['preprocess'] = data['preprocess_cmd']
+ elif preprocess_type == self.Process.SCRIPT:
+ data['preprocess'] = data['preprocess_script']
+ else:
+ data['preprocess'] = ''
+
+ postprocess_type = data.get('postprocess_type')
+ if postprocess_type == self.Process.CMD:
+ data['postprocess'] = data['postprocess_cmd']
+ elif postprocess_type == self.Process.SCRIPT:
+ data['postprocess'] = data['postprocess_script']
+ else:
+ data['postprocess'] = ''
+
+ return data
+
+ def clean_application(self):
+ return self.cleaned_data['application'].split('/', 1) if self.cleaned_data['application'] else ''
+
+ def clean_nodes(self):
+ return map(int, self.cleaned_data['nodes'].split(':', 2)) if self.cleaned_data['nodes'] else ''
+
+ def clean_executable(self):
+ return self._gsiftp_suffix(self.cleaned_data['executable'])
+
+ def clean_master_file(self):
+ return self._gsiftp_suffix(self.cleaned_data['master_file'])
+
+ def clean_input(self):
+ return self._gsiftp_suffix(self.cleaned_data['input'])
+
+ def clean_stage_in(self):
+ return [self._gsiftp_suffix(item) for item in self.cleaned_data['stage_in']]
+
+ def clean_preprocess_script(self):
+ return self._gsiftp_suffix(self.cleaned_data['preprocess_script'])
+
+ def clean_postprocess_script(self):
+ return self._gsiftp_suffix(self.cleaned_data['postprocess_script'])
+
+ def clean_pdb_file(self):
+ return self._gsiftp_suffix(self.cleaned_data['pdb_file'])
+
+ def clean_sequence(self):
+ return self.cleaned_data['sequence'].strip(' \t\n\r')
+
+ @staticmethod
+ def _gsiftp_suffix(url):
+ if url:
+ return url if url.startswith('gsiftp://') else 'gsiftp://' + url
+
+ def _init_user_choices(self, name):
+ initial = self.initial.get(name)
+ choices = self.data.getlist(name)[:] if self.data else []
+
+ if initial:
+ choices += initial if isinstance(initial, list) else [initial]
+
+ if choices:
+ self.fields[name].choices += ((v, v) for v in choices)
+
+
+class EnvForm(forms.Form):
+ name = forms.CharField(label=u"Nazwa", max_length=100, validators=[env_name_validator],
+ widget=forms.TextInput(attrs={'placeholder': u'Nazwa'}))
+ value = forms.CharField(label=u"Wartość", max_length=500,
+ widget=forms.TextInput(attrs={'placeholder': u'Wartość'}))
+
+
+EnvFormSet = forms.formset_factory(EnvForm, can_delete=True, extra=0)
+
+
+class ColumnsForm(forms.Form):
+ JOB_ID, DESCRIPTION, SUBMISSION, START, END, STATUS, HOST = range(7)
+ COLUMNS_CHOICES = (
+ (JOB_ID, u"Identyfikator zadania"),
+ (DESCRIPTION, u"Opis"),
+ (SUBMISSION, u"Wysłane"),
+ (START, u"Start"),
+ (END, u"Koniec"),
+ (STATUS, u"Status"),
+ (HOST, u"Host"),
+ )
+
+ columns = forms.MultipleChoiceField(choices=COLUMNS_CHOICES, initial=[k for k, v in COLUMNS_CHOICES[1:]],
+ label=u"Kolumny", required=False, widget=forms.CheckboxSelectMultiple)
+
+
+class JobTemplateForm(forms.ModelForm):
+ class Meta:
+ model = JobTemplate
+ fields = ('name',)
projects / qcg-portal.git / blobdiff