fraction of native side-chain concacts plot

[django_unres.git] / files / matplotlib_fit_hist.py

diff --git a/files/matplotlib_fit_hist.py b/files/matplotlib_fit_hist.py
index 1f5050c..cbdafe0 100755 (executable)
--- a/files/matplotlib_fit_hist.py
+++ b/files/matplotlib_fit_hist.py
@@ -27,7 +27,7 @@ with open('md.stat','r') as f:
 
 if ncolumns==14:  
  x,y= np.loadtxt('md.stat',usecols=(0,10),skiprows=10,unpack=True)
- x1,e,r,gy= np.loadtxt('md.stat',usecols=(0,3,5,12),skiprows=0,unpack=True)
+ x1,e,r,gy,nc= np.loadtxt('md.stat',usecols=(0,3,5,12,6),skiprows=0,unpack=True)
 else:
  x,y= np.loadtxt('md.stat',usecols=(0,6),skiprows=10,unpack=True)
  x1,e,gy= np.loadtxt('md.stat',usecols=(0,3,8),skiprows=0,unpack=True)
@@ -74,4 +74,10 @@ if ncolumns==14:
  plt.ylabel('RMSD')
  plt.plot(x1,r,'.')
  plt.savefig('md_rms.png')
+
+ plt.clf()
+ plt.xlabel('step')
+ plt.ylabel('fraction of native side-chain concacts')
+ plt.plot(x1,nc,'.')
+ plt.savefig('md_fracn.png')
  
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