/users2/local/mmtsb/perl/convpdb.pl -amber -out generic_noh stop.pdb > $pdb
rm tmp1.pdb z_tleap.pdb t.top t.crd leap.log noh.pdb zakresy.csv RST.dat restrt mdinfo stop.pdb
/users2/local/mmtsb/perl/convpdb.pl -amber -out generic_noh stop.pdb > $pdb
rm tmp1.pdb z_tleap.pdb t.top t.crd leap.log noh.pdb zakresy.csv RST.dat restrt mdinfo stop.pdb