+ if ( `grep -c pdbstart file.inp` ) then
+ /users2/local/pymol_1.6/pymol -c ../files/overlap.pml
+ ../files/fluct_plot.py intra_fit.pdb > fluctuations.txt
+ /users2/local/pymol_1.6/pymol -c -r ../files/fluct.py
+ rm -f intra_fit.pdb
+ endif
+ rm -rf tmp file_MD000.pdb