+ if instance.unres_ff =='NEWCT-9P':
+ f.write(seq_2d_write_50(seq_2d_xx(instance.md_2d,seq)))
+ else:
+ f.write(seq_2d_write(seq_2d_xx(instance.md_2d,seq)))
+
+ if instance.type == 'dock':
+ f.write('HOMOL_DIST=0.1 HOMOL_ANGLE=1.0 HOMOL_THETA=1.0 HOMOL_SCD=1.0 DIST_CUT=15.0 &\n')
+ f.write('READ2SIGMA START_FROM_MODELS\n')
+ for i in range(1,10):
+ f.write('model0'+str(i)+'.pdb\n')
+ for i in range(10,21):
+ f.write('model'+str(i)+'.pdb\n')