clean code and combine piasek and etoh versions make easy install on any system with pbs add javascript instead of separate forms option of automatic download file from PDB using id check input pdb for: unknown residues, max length (1000), max number of dissulfides (30), etc, and display error check input for other errors (sequence ?) add web viewer NGL WebGL # add BOXX BOXY BOXZ in advanced md and mremd # done dynamic dissulfides input - all and selected cys homology restraints input other restrains input automatic secondary structure restrains (psipred) MREMD - add cluster parameters, change after run and rerun only cluster analysis - button to make movie from selected trajectory after run examples+gallery documentation automatic rm of old jobs ? ### NAR requirements: include a simple mechanism to try out sample data provided by the authors, for example, a button for automatic loading of the data. Sample data must be accessible to users so that they can confirm data formatting requirements # ? contain help pages or a tutorial with links to sample output that performs interactively in the same way as real output. The help pages must include information on how to interpret the results returned by the web server # ? # be primarily web-based and viewable on the website. Use of browser plugins # for data visualization is encouraged. However, use of Flash plugins is # discouraged due to security issues and websites that use Java plugins will # no longer be accepted # OK # provide a web link to the results if the website is not able to return # results immediately. The link should be provided at the time of data # submission and allow the user to bookmark and access the results at a later # time. Ideally, the link will report the status of the job (queued, running, # or finished). Do not assume that users will provide an email address for # results notification. Any request for an email must state that it is # optional. Websites that use a guest login will not be approved # # OK link uses task.id http://ha1.chem.univ.gda.pl:8001/details/942/ # keep every user’s submitted data private and not viewable by anyone other # than the user or those given permission by the user # # OK ? scramble task.id ? add user.id= 19da81cb0ad5492dac8e4eaefd28949e ?