2 !-----------------------------------------------------------------------------
12 !-----------------------------------------------------------------------------
15 !-----------------------------------------------------------------------------
17 !-----------------------------------------------------------------------------
19 subroutine WHAMCALC(islice,*)
20 ! Weighed Histogram Analysis Method (WHAM) code
21 ! Written by A. Liwo based on the work of Kumar et al.,
22 ! J.Comput.Chem., 13, 1011 (1992)
24 ! 2/1/05 Multiple temperatures allowed.
25 ! 2/2/05 Free energies calculated directly from data points
26 ! acc. to Eq. (21) of Kumar et al.; final histograms also
27 ! constructed based on this equation.
28 ! 2/12/05 Multiple parameter sets included
30 ! 2/2/05 Parallel version
34 use io_base, only:ilen
39 ! include "DIMENSIONS"
40 ! include "DIMENSIONS.ZSCOPT"
41 ! include "DIMENSIONS.FREE"
42 integer,parameter :: NGridT=400
43 integer,parameter :: MaxBinRms=100,MaxBinRgy=100
44 integer,parameter :: MaxHdim=200
45 ! parameter (MaxHdim=200000)
46 integer,parameter :: maxinde=200
48 integer :: ierror,errcode,status(MPI_STATUS_SIZE)
50 ! include "COMMON.CONTROL"
51 ! include "COMMON.IOUNITS"
52 ! include "COMMON.FREE"
53 ! include "COMMON.ENERGIES"
54 ! include "COMMON.FFIELD"
55 ! include "COMMON.SBRIDGE"
56 ! include "COMMON.PROT"
57 ! include "COMMON.ENEPS"
58 integer,parameter :: MaxPoint=MaxStr,&
59 MaxPointProc=MaxStr_Proc
60 real(kind=8),parameter :: finorm_max=1.0d0
61 real(kind=8) :: potfac,expfac,vf
62 ! real(kind=8) :: potfac,entmin,entmax,expfac,vf
64 integer :: i,ii,j,jj,k,kk,l,m,ind,iter,t,tmax,ient,ientmax,iln
65 integer :: start,end,iharm,ib,iib,nbin1,nbin,nbin_rms,nbin_rgy,&
66 nbin_rmsrgy,liczbaW,iparm,nFi,indrgy,indrms
67 ! 4/17/17 AKS & AL: histent is obsolete
68 integer :: htot(0:MaxHdim)!,histent(0:2000)
69 real(kind=8) :: v(MaxPointProc,MaxR,MaxT_h,nParmSet) !(MaxPointProc,MaxR,MaxT_h,Max_Parm)
70 real(kind=8) :: energia(0:n_ene)
71 !el real(kind=8) :: energia(0:max_ene)
73 integer :: tmax_t,upindE_p
74 real(kind=8) :: fi_p(MaxR,MaxT_h,nParmSet), &
75 fi_p_min(MaxR,MaxT_h,nParmSet) !(MaxR,MaxT_h,Max_Parm)
76 real(kind=8),dimension(0:nGridT,nParmSet) :: sumW_p,sumE_p,&
77 sumEbis_p,sumEsq_p !(0:nGridT,Max_Parm)
78 real(kind=8),dimension(MaxQ1,0:nGridT,nParmSet) :: sumQ_p,&
79 sumQsq_p,sumEQ_p,sumEprim_p !(MaxQ1,0:nGridT,Max_Parm)
80 real(kind=8) :: hfin_p(0:MaxHdim,maxT_h),&
81 hfin_ent_p(0:MaxHdim),histE_p(0:maxindE),sumH,&
82 hrmsrgy_p(0:MaxBinRgy,0:MaxBinRms,maxT_h)
83 real(kind=8) :: rgymin_t,rmsmin_t,rgymax_t,rmsmax_t
84 real(kind=8) :: potEmin_t,potEmin_t_all(maxT_h,Max_Parm)!,entmin_p,entmax_p
85 ! integer :: histent_p(0:2000)
86 logical :: lprint=.true.
88 real(kind=8) :: delta_T=1.0d0,iientmax
89 real(kind=8) :: rgymin,rmsmin,rgymax,rmsmax
90 real(kind=8),dimension(0:nGridT,nParmSet) :: sumW,sumE,&
91 sumEsq,sumEprim,sumEbis !(0:NGridT,Max_Parm)
92 real(kind=8),dimension(MaxQ1,0:nGridT,nParmSet) :: sumQ,&
93 sumQsq,sumEQ !(MaxQ1,0:NGridT,Max_Parm)
94 real(kind=8) :: betaT,weight,econstr
95 real(kind=8) :: fi(MaxR,MaxT_h,nParmSet),& !(MaxR,maxT_h,Max_Parm)
96 ddW,dd1,dd2,hh,dmin,denom,finorm,avefi,pom,&
97 hfin(0:MaxHdim,maxT_h),histE(0:maxindE),&
98 hrmsrgy(0:MaxBinRgy,0:MaxBinRms,maxT_h),&
100 hfin_ent(0:MaxHdim),vmax,aux,fi_min(MaxR,maxT_h,nParmSet), &
101 potEmin_all(maxT_h,Max_Parm),potEmin_min,entfac_min
102 real(kind=8) :: fT(6),fTprim(6),fTbis(6),quot,quotl1,quotl,kfacl,&
103 eprim,ebis,temper,kfac=2.4d0,T0=300.0d0,startGridT=200.0d0,&
104 eplus,eminus,logfac,tanhT,tt
105 real(kind=8) :: etot,evdw,evdw_t,evdw2,ees,evdw1,ebe,etors,&
106 escloc,ehpb,ecorr,ecorr5,ecorr6,eello_turn4,eello_turn3,&
107 eello_turn6,eel_loc,edihcnstr,etors_d,estr,evdw2_14,esccor, &
108 ecationcation,ecation_prot, evdwpp,eespp ,evdwpsb,eelpsb, &
109 evdwsb, eelsb, estr_nucl,ebe_nucl,esbloc,etors_nucl,etors_d_nucl,&
110 ecorr_nucl, ecorr3_nucl,epeppho, escpho, epepbase,escbase,ecation_nucl
113 integer :: ind_point(maxpoint),upindE,indE
114 character(len=16) :: plik
115 character(len=1) :: licz1
116 character(len=2) :: licz2
117 character(len=3) :: licz3
118 character(len=128) :: nazwa
123 write(licz2,'(bz,i2.2)') islice
125 write (iout,'(//80(1h-)/"Solving WHAM equations for slice",&
126 i2/80(1h-)//)') islice
127 write (iout,*) "delta",delta," nbin1",nbin1
128 write (iout,*) "MaxN",MaxN," MaxQ",MaxQ," MaHdim",MaxHdim
135 potEmin_all(j,i)=1.0d15
152 if (potE(i,j).le.potEmin) potEmin=potE(i,j)
154 if (q(nQ+1,i).lt.rmsmin) rmsmin=q(nQ+1,i)
155 if (q(nQ+1,i).gt.rmsmax) rmsmax=q(nQ+1,i)
156 if (q(nQ+2,i).lt.rgymin) rgymin=q(nQ+2,i)
157 if (q(nQ+2,i).gt.rgymax) rgymax=q(nQ+2,i)
160 ind=(q(j,i)-dmin+1.0d-8)/delta
162 ind_point(i)=ind_point(i)+ind
164 ind_point(i)=ind_point(i)+nbin1**(j-1)*ind
166 ! write (iout,*) "i",i," j",j," q",q(j,i)," ind_point",
169 if (ind_point(i).lt.0 .or. ind_point(i).gt.MaxHdim) then
170 write (iout,*) "Error - index exceeds range for point",i,&
171 " q=",q(j,i)," ind",ind_point(i)
173 write (iout,*) "Processor",me1
175 call MPI_Abort(MPI_COMM_WORLD, Ierror, Errcode )
180 if (ind_point(i).gt.tmax) tmax=ind_point(i)
181 htot(ind_point(i))=htot(ind_point(i))+1
183 write (iout,*) "i",i,"q",(q(j,i),j=1,nQ)," ind",ind_point(i),&
184 " htot",htot(ind_point(i))
191 write (iout,'(a)') "Numbers of counts in Q bins"
193 if (htot(t).gt.0) then
194 write (iout,'(i15,$)') t
197 jj = mod(liczbaW,nbin1)
198 liczbaW=liczbaW/nbin1
199 write (iout,'(i5,$)') jj
201 write (iout,'(i8)') htot(t)
205 write (iout,'(a,i3)') "Number of data points for parameter set",&
207 write (iout,'(i7,$)') ((snk(m,ib,iparm,islice),m=1,nr(ib,iparm)),&
209 write (iout,'(i8)') stot(islice)
215 call MPI_AllReduce(tmax,tmax_t,1,MPI_INTEGER,MPI_MAX,&
218 ! call MPI_AllReduce(potEmin,potEmin_t,1,MPI_DOUBLE_PRECISION,&
219 ! MPI_MIN,WHAM_COMM,IERROR) !????
220 call MPI_AllReduce(rmsmin,rmsmin_t,1,MPI_DOUBLE_PRECISION,&
221 MPI_MIN,WHAM_COMM,IERROR)
222 call MPI_AllReduce(rmsmax,rmsmax_t,1,MPI_DOUBLE_PRECISION,&
223 MPI_MAX,WHAM_COMM,IERROR)
224 call MPI_AllReduce(rgymin,rgymin_t,1,MPI_DOUBLE_PRECISION,&
225 MPI_MIN,WHAM_COMM,IERROR)
226 call MPI_AllReduce(rgymax,rgymax_t,1,MPI_DOUBLE_PRECISION,&
227 MPI_MAX,WHAM_COMM,IERROR)
228 ! potEmin=potEmin_t !/2 try now??
233 write (iout,*) "potEmin",potEmin
235 rmsmin=deltrms*dint(rmsmin/deltrms)
236 rmsmax=deltrms*dint(rmsmax/deltrms)
237 rgymin=deltrms*dint(rgymin/deltrgy)
238 rgymax=deltrms*dint(rgymax/deltrgy)
239 nbin_rms=(rmsmax-rmsmin)/deltrms
240 nbin_rgy=(rgymax-rgymin)/deltrgy
241 write (iout,*) "rmsmin",rmsmin," rmsmax",rmsmax," rgymin",rgymin,&
242 " rgymax",rgymax," nbin_rms",nbin_rms," nbin_rgy",nbin_rgy
249 write (iout,*) "nFi",nFi
250 ! Compute the Boltzmann factor corresponing to restrain potentials in different
257 ! write (9,'(3i5,f10.5)') i,(iparm,potE(i,iparm),iparm=1,nParmSet)
260 write (iout,'(2i5,21f8.2)') i,iparm,&
261 (enetb(k,i,iparm),k=1,21)
263 call restore_parm(iparm)
265 write (iout,*) wsc,wscp,welec,wvdwpp,wang,wtor,wscloc,&
266 wcorr,wcorr5,wcorr6,wturn4,wturn3,wturn6,wel_loc,&
267 wtor_d,wsccor,wbond,wcatcat
270 !el old rascale weights
272 ! if (rescale_modeW.eq.1) then
273 ! quot=1.0d0/(beta_h(ib,iparm)*1.987D-3*T0)
280 ! fT(l)=kfacl/(kfacl-1.0d0+quotl)
283 ! tt = 1.0d0/(beta_h(ib,iparm)*1.987D-3)
284 ! ft(6)=(320.0d0+80.0d0*dtanh((tt-320.0d0)/80.0d0))/320.0d0
285 !#elif defined(FUNCT)
286 ! ft(6)=1.0d0/(beta_h(ib,iparm)*1.987D-3*T0)
290 ! else if (rescale_modeW.eq.2) then
291 ! quot=1.0d0/(T0*beta_h(ib,iparm)*1.987D-3)
295 ! fT(l)=1.12692801104297249644d0/ &
296 ! dlog(dexp(quotl)+dexp(-quotl))
299 ! tt = 1.0d0/(beta_h(ib,iparm)*1.987D-3)
300 ! ft(6)=(320.0d0+80.0d0*dtanh((tt-320.0d0)/80.0d0))/320.0d0
301 !#elif defined(FUNCT)
302 ! ft(6)=1.0d0/(beta_h(ib,iparm)*1.987D-3*T0)
306 ! write (iout,*) 1.0d0/(beta_h(ib,iparm)*1.987D-3),ft
307 ! else if (rescale_modeW.eq.0) then
312 ! write (iout,*) "Error in WHAM_CALC: wrong RESCALE_MODE",&
317 ! el end old rescale weights
318 call rescale_weights(1.0d0/(beta_h(ib,iparm)*1.987D-3))
320 ! call etot(enetb(0,i,iparm))
321 evdw=enetb(1,i,iparm)
322 ! evdw_t=enetb(21,i,iparm)
323 evdw_t=enetb(20,i,iparm)
325 ! evdw2_14=enetb(17,i,iparm)
326 evdw2_14=enetb(18,i,iparm)
327 evdw2=enetb(2,i,iparm)+evdw2_14
329 evdw2=enetb(2,i,iparm)
334 evdw1=enetb(16,i,iparm)
339 ecorr=enetb(4,i,iparm)
340 ecorr5=enetb(5,i,iparm)
341 ecorr6=enetb(6,i,iparm)
342 eel_loc=enetb(7,i,iparm)
343 eello_turn3=enetb(8,i,iparm)
344 eello_turn4=enetb(9,i,iparm)
345 eello_turn6=enetb(10,i,iparm)
346 ebe=enetb(11,i,iparm)
347 escloc=enetb(12,i,iparm)
348 etors=enetb(13,i,iparm)
349 etors_d=enetb(14,i,iparm)
350 ehpb=enetb(15,i,iparm)
351 ! estr=enetb(18,i,iparm)
352 estr=enetb(17,i,iparm)
353 ! esccor=enetb(19,i,iparm)
354 esccor=enetb(21,i,iparm)
355 ! edihcnstr=enetb(20,i,iparm)
356 edihcnstr=enetb(19,i,iparm)
357 ecationcation=enetb(41,i,iparm)
358 ecation_prot=enetb(42,i,iparm)
359 evdwpp = enetb(26,i,iparm)
360 eespp = enetb(27,i,iparm)
361 evdwpsb = enetb(28,i,iparm)
362 eelpsb = enetb(29,i,iparm)
363 evdwsb = enetb(30,i,iparm)
364 eelsb = enetb(31,i,iparm)
365 estr_nucl = enetb(32,i,iparm)
366 ebe_nucl = enetb(33,i,iparm)
367 esbloc = enetb(34,i,iparm)
368 etors_nucl = enetb(35,i,iparm)
369 etors_d_nucl = enetb(36,i,iparm)
370 ecorr_nucl = enetb(37,i,iparm)
371 ecorr3_nucl = enetb(38,i,iparm)
372 epeppho= enetb(49,i,iparm)
373 escpho= enetb(48,i,iparm)
374 epepbase= enetb(47,i,iparm)
375 escbase= enetb(46,i,iparm)
376 ecation_nucl= enetb(50,i,iparm)
378 write (iout,'(3i5,6f5.2,15f12.3)') i,ib,iparm,(ft(l),l=1,6),&
379 evdw+evdw_t,evdw2,ees,evdw1,ecorr,eel_loc,estr,ebe,escloc,&
380 etors,etors_d,eello_turn3,eello_turn4,esccor,ecationcation
384 ! etot=wsc*(evdw+ft(6)*evdw_t)+wscp*evdw2+ft(1)*welec*ees &
386 ! +wang*ebe+ft(1)*wtor*etors+wscloc*escloc &
387 ! +wstrain*ehpb+nss*ebr+ft(3)*wcorr*ecorr+ft(4)*wcorr5*ecorr5 &
388 ! +ft(5)*wcorr6*ecorr6+ft(3)*wturn4*eello_turn4 &
389 ! +ft(2)*wturn3*eello_turn3 &
390 ! +ft(5)*wturn6*eturn6+ft(2)*wel_loc*eel_loc &
391 ! +edihcnstr+ft(2)*wtor_d*etors_d+ft(1)*wsccor*esccor &
394 ! etot=wsc*(evdw+ft(6)*evdw_t)+wscp*evdw2 &
395 ! +ft(1)*welec*(ees+evdw1) &
396 ! +wang*ebe+ft(1)*wtor*etors+wscloc*escloc &
397 ! +wstrain*ehpb+nss*ebr+ft(3)*wcorr*ecorr+ft(4)*wcorr5*ecorr5 &
398 ! +ft(5)*wcorr6*ecorr6+ft(3)*wturn4*eello_turn4 &
399 ! +ft(2)*wturn3*eello_turn3 &
400 ! +ft(5)*wturn6*eturn6+ft(2)*wel_loc*eel_loc+edihcnstr &
401 ! +ft(2)*wtor_d*etors_d+ft(1)*wsccor*esccor &
406 etot=wsc*evdw+wscp*evdw2+welec*ees &
408 +wang*ebe+wtor*etors+wscloc*escloc &
409 +wstrain*ehpb+wcorr*ecorr+wcorr5*ecorr5 &
410 +wcorr6*ecorr6+wturn4*eello_turn4 &
411 +wturn3*eello_turn3 &
412 +wturn6*eello_turn6+wel_loc*eel_loc &
413 +edihcnstr+wtor_d*etors_d+wsccor*esccor &
414 +wbond*estr+wcatprot*ecation_prot+wcatcat*ecationcation&
415 +wbond_nucl*estr_nucl+wang_nucl*ebe_nucl&
416 +wvdwpp_nucl*evdwpp+welpp*eespp+wvdwpsb*evdwpsb+welpsb*eelpsb&
417 +wvdwsb*evdwsb+welsb*eelsb+wsbloc*esbloc+wtor_nucl*etors_nucl&
418 +wtor_d_nucl*etors_d_nucl+wcorr_nucl*ecorr_nucl+wcorr3_nucl*ecorr3_nucl&
420 +wpepbase*epepbase+wscpho*escpho+wpeppho*epeppho+wcatnucl*ecation_nucl
425 etot=wsc*evdw+wscp*evdw2 &
427 +wang*ebe+wtor*etors+wscloc*escloc &
428 +wstrain*ehpb+wcorr*ecorr+wcorr5*ecorr5 &
429 +wcorr6*ecorr6+wturn4*eello_turn4 &
430 +wturn3*eello_turn3 &
431 +wturn6*eello_turn6+wel_loc*eel_loc+edihcnstr &
432 +wtor_d*etors_d+wsccor*esccor &
433 +wbond*estr+wcatprot*ecation_prot+wcatcat*ecationcation&
434 +wbond_nucl*estr_nucl+wang_nucl*ebe_nucl&
435 +wvdwpp_nucl*evdwpp+welpp*eespp+wvdwpsb*evdwpsb+welpsb*eelpsb&
436 +wvdwsb*evdwsb+welsb*eelsb+wsbloc*esbloc+wtor_nucl*etors_nucl&
437 +wtor_d_nucl*etors_d_nucl+wcorr_nucl*ecorr_nucl+wcorr3_nucl*ecorr3_nucl&
439 +wpepbase*epepbase+wscpho*escpho+wpeppho*epeppho+wcatnucl*ecation_nucl
446 write (iout,*) i,iparm,1.0d0/(beta_h(ib,iparm)*1.987D-3),&
450 if (iparm.eq.1 .and. ib.eq.1) then
451 write (iout,*)"Conformation",i
454 energia(k)=enetb(k,i,iparm)
456 ! call enerprint(energia(0),fT)
457 call enerprint(energia(0))
464 Econstr=Econstr+Kh(j,kk,ib,iparm) &
465 *(ddW-q0(j,kk,ib,iparm))**2
468 -beta_h(ib,iparm)*(etot-potEmin+Econstr)
470 write (iout,'(4i5,4e15.5)') i,kk,ib,iparm,&
471 etot,potEmin,etot-potEmin,v(i,kk,ib,iparm)
477 ! Simple iteration to calculate free energies corresponding to all simulation
481 ! Compute new free-energy values corresponding to the righ-hand side of the
482 ! equation and their derivatives.
483 write (iout,*) "------------------------fi"
493 vf=v(t,l,k,i)+f(l,k,i)
494 if (vf.gt.vmax) vmax=vf
502 aux=f(l,k,i)+v(t,l,k,i)-vmax
503 if (aux.gt.-200.0d0) &
504 denom=denom+snk(l,k,i,islice)*dexp(aux)
508 entfac(t)=-dlog(denom)-vmax
509 if (entfac(t).lt.entfac_min) entfac_min=entfac(t)
511 write (iout,*) t,"vmax",vmax," denom",denom,"entfac",entfac(t)
516 do ii=1,nR(iib,iparm)
518 fi_p_min(ii,iib,iparm)=-1.0d5
520 ! fi_p(ii,iib,iparm)=fi_p(ii,iib,iparm) &
521 ! +dexp(v(t,ii,iib,iparm)+entfac(t))
522 aux=v(t,ii,iib,iparm)+entfac(t)
523 if (aux.gt.fi_p_min(ii,iib,iparm)) fi_p_min(ii,iib,iparm)=aux
527 write (iout,'(4i5,4e15.5)') t,ii,iib,iparm,&
528 v(t,ii,iib,iparm),entfac(t),fi_p(ii,iib,iparm),fi_p_min(ii,iib,iparm)
533 ! fi(ii,iib,iparm)=0.0d0
535 ! fi(ii,iib,iparm)=fi(ii,iib,iparm) &
536 ! +dexp(v(t,ii,iib,iparm)+entfac(t))
537 aux=v(t,ii,iib,iparm)+entfac(t)
538 if (aux.gt.fi_min(ii,iib,iparm))
539 & fi_min(ii,iib,iparm)=aux
549 write (iout,*) "fi before MPI_Reduce me",me,' master',master
551 do ib=1,nT_h(nparmset)
552 write (iout,*) "iparm",iparm," ib",ib
553 write (iout,*) "beta=",beta_h(ib,iparm)
554 write (iout,'(8e15.5)') (fi_p(i,ib,iparm),i=1,nR(ib,iparm))
555 write (iout,'(8e15.5)') (fi_p_min(i,ib,iparm),i=1,nR(ib,iparm))
559 call MPI_AllReduce(fi_p_min,fi_min,MaxR*MaxT_h*nParmSet, &
560 MPI_DOUBLE_PRECISION,MPI_MAX,WHAM_COMM,IERROR)
563 write (iout,*) "fi_min after AllReduce"
566 write (iout,*) (i,j,k,fi_min(k,j,i),k=1,nR(j,i))
574 do ii=1,nR(iib,iparm)
576 fi_p(ii,iib,iparm)=0.0d0
578 fi_p(ii,iib,iparm)=fi_p(ii,iib,iparm) &
579 +dexp(v(t,ii,iib,iparm)+entfac(t)-fi_min(ii,iib,iparm))
581 write (iout,'(4i5,4e15.5)') t,ii,iib,iparm, &
582 v(t,ii,iib,iparm),entfac(t),fi_min(ii,iib,iparm), &
587 fi(ii,iib,iparm)=0.0d0
589 fi(ii,iib,iparm)=fi(ii,iib,iparm) &
590 +dexp(v(t,ii,iib,iparm)+entfac(t)-fi_min(ii,iib,iparm))
599 write (iout,*) "fi before MPI_Reduce me",me,' master',master
601 do ib=1,nT_h(nparmset)
602 write (iout,*) "iparm",iparm," ib",ib
603 write (iout,*) "beta=",beta_h(ib,iparm)
604 write (iout,'(8e15.5)') (fi_p(i,ib,iparm),i=1,nR(ib,iparm))
609 write (iout,*) "REDUCE size",maxR,MaxT_h,nParmSet, &
611 write (iout,*) "MPI_COMM_WORLD",MPI_COMM_WORLD, &
612 " WHAM_COMM",WHAM_COMM
615 write (iout,*) "REDUCE size",maxR,MaxT_h,nParmSet,&
617 write (iout,*) "MPI_COMM_WORLD",MPI_COMM_WORLD,&
618 " WHAM_COMM",WHAM_COMM
619 call MPI_Reduce(fi_p(1,1,1),fi(1,1,1),maxR*MaxT_h*nParmSet,&
620 MPI_DOUBLE_PRECISION,&
621 MPI_SUM,Master,WHAM_COMM,IERROR)
623 write (iout,*) "fi after MPI_Reduce nparmset",nparmset
625 write (iout,*) "iparm",iparm
627 write (iout,*) "beta=",beta_h(ib,iparm)
628 write (iout,'(8e15.5)') (fi(i,ib,iparm),i=1,nR(ib,iparm))
632 if (me1.eq.Master) then
638 fi(i,ib,iparm)=-dlog(fi(i,ib,iparm))-fi_min(i,ib,iparm)
639 avefi=avefi+fi(i,ib,iparm)
645 write (iout,*) "Parameter set",iparm
647 write (iout,*) "beta=",beta_h(ib,iparm)
649 fi(i,ib,iparm)=fi(i,ib,iparm)-avefi
651 write (iout,'(8f10.5)') (fi(i,ib,iparm),i=1,nR(ib,iparm))
652 write (iout,'(8f10.5)') (f(i,ib,iparm),i=1,nR(ib,iparm))
656 ! Compute the norm of free-energy increments.
661 finorm=finorm+dabs(fi(i,ib,iparm)-f(i,ib,iparm))
662 f(i,ib,iparm)=fi(i,ib,iparm)
667 write (iout,*) 'Iteration',iter,' finorm',finorm
671 call MPI_Bcast(f(1,1,1),MaxR*MaxT_h*nParmSet,&
672 MPI_DOUBLE_PRECISION,Master,&
674 call MPI_Bcast(finorm,1,MPI_DOUBLE_PRECISION,Master,&
677 ! Exit, if the increment norm is smaller than pre-assigned tolerance.
678 if (finorm.lt.fimin) then
679 write (iout,*) 'Iteration converged'
686 ! Now, put together the histograms from all simulations, in order to get the
687 ! unbiased total histogram.
688 !C Determine the minimum free energies
694 !c write (9,'(3i5,f10.5)') i,(iparm,potE(i,iparm),iparm=1,nParmSet)
697 write (iout,'(2i5,21f8.2)') i,iparm, &
698 (enetb(k,i,iparm),k=1,26)
700 call restore_parm(iparm)
702 write (iout,*) wsc,wscp,welec,wvdwpp,wang,wtor,wscloc, &
703 wcorr,wcorr5,wcorr6,wturn4,wturn3,wturn6,wel_loc, &
707 if (rescale_modeW.eq.1) then
708 quot=1.0d0/(beta_h(ib,iparm)*1.987D-3*T0)
715 fT(l)=kfacl/(kfacl-1.0d0+quotl)
718 tt = 1.0d0/(beta_h(ib,iparm)*1.987D-3)
719 ft(6)=(320.0d0+80.0d0*dtanh((tt-320.0d0)/80.0d0))/320.0d0
721 ft(6)=1.0d0/(beta_h(ib,iparm)*1.987D-3*T0)
725 else if (rescale_modeW.eq.2) then
726 quot=1.0d0/(T0*beta_h(ib,iparm)*1.987D-3)
730 fT(l)=1.12692801104297249644d0/ &
731 dlog(dexp(quotl)+dexp(-quotl))
734 tt = 1.0d0/(beta_h(ib,iparm)*1.987D-3)
735 ft(6)=(320.0d0+80.0d0*dtanh((tt-320.0d0)/80.0d0))/320.0d0
737 ft(6)=1.0d0/(beta_h(ib,iparm)*1.987D-3*T0)
741 !c write (iout,*) 1.0d0/(beta_h(ib,iparm)*1.987D-3),ft
742 else if (rescale_modeW.eq.0) then
747 write (iout,*) "Error in WHAM_CALC: wrong RESCALE_MODE", &
752 evdw=enetb(1,i,iparm)
753 ! evdw_t=enetb(21,i,iparm)
754 evdw_t=enetb(20,i,iparm)
756 ! evdw2_14=enetb(17,i,iparm)
757 evdw2_14=enetb(18,i,iparm)
758 evdw2=enetb(2,i,iparm)+evdw2_14
760 evdw2=enetb(2,i,iparm)
765 evdw1=enetb(16,i,iparm)
770 ecorr=enetb(4,i,iparm)
771 ecorr5=enetb(5,i,iparm)
772 ecorr6=enetb(6,i,iparm)
773 eel_loc=enetb(7,i,iparm)
774 eello_turn3=enetb(8,i,iparm)
775 eello_turn4=enetb(9,i,iparm)
776 eello_turn6=enetb(10,i,iparm)
777 ebe=enetb(11,i,iparm)
778 escloc=enetb(12,i,iparm)
779 etors=enetb(13,i,iparm)
780 etors_d=enetb(14,i,iparm)
781 ehpb=enetb(15,i,iparm)
782 ! estr=enetb(18,i,iparm)
783 estr=enetb(17,i,iparm)
784 ! esccor=enetb(19,i,iparm)
785 esccor=enetb(21,i,iparm)
786 ! edihcnstr=enetb(20,i,iparm)
787 edihcnstr=enetb(19,i,iparm)
788 ! ehomology_constr=enetb(22,i,iparm)
789 ! esaxs=enetb(26,i,iparm)
790 ecationcation=enetb(41,i,iparm)
791 ecation_prot=enetb(42,i,iparm)
792 evdwpp = enetb(26,i,iparm)
793 eespp = enetb(27,i,iparm)
794 evdwpsb = enetb(28,i,iparm)
795 eelpsb = enetb(29,i,iparm)
796 evdwsb = enetb(30,i,iparm)
797 eelsb = enetb(31,i,iparm)
798 estr_nucl = enetb(32,i,iparm)
799 ebe_nucl = enetb(33,i,iparm)
800 esbloc = enetb(34,i,iparm)
801 etors_nucl = enetb(35,i,iparm)
802 etors_d_nucl = enetb(36,i,iparm)
803 ecorr_nucl = enetb(37,i,iparm)
804 ecorr3_nucl = enetb(38,i,iparm)
805 epeppho= enetb(49,i,iparm)
806 escpho= enetb(48,i,iparm)
807 epepbase= enetb(47,i,iparm)
808 escbase= enetb(46,i,iparm)
809 ecation_nucl=enetb(50,i,iparm)
811 etot=wsc*(evdw+ft(6)*evdw_t)+wscp*evdw2+ft(1)*welec*ees &
813 +wang*ebe+ft(1)*wtor*etors+wscloc*escloc &
814 +wstrain*ehpb+ft(3)*wcorr*ecorr+ft(4)*wcorr5*ecorr5 &
815 +ft(5)*wcorr6*ecorr6+ft(3)*wturn4*eello_turn4 &
816 +ft(2)*wturn3*eello_turn3 &
817 +ft(5)*wturn6*eello_turn6+ft(2)*wel_loc*eel_loc &
818 +edihcnstr+ft(2)*wtor_d*etors_d+ft(1)*wsccor*esccor &
819 +wbond*estr+wcatprot*ecation_prot+wcatcat*ecationcation &
820 +wbond_nucl*estr_nucl+wang_nucl*ebe_nucl&
821 +wvdwpp_nucl*evdwpp+welpp*eespp+wvdwpsb*evdwpsb+welpsb*eelpsb&
822 +wvdwsb*evdwsb+welsb*eelsb+wsbloc*esbloc+wtor_nucl*etors_nucl&
823 *ft(1)+wtor_d_nucl*ft(2)*etors_d_nucl+wcorr_nucl*ecorr_nucl &
824 +wcorr3_nucl*ecorr3_nucl&
826 +ft(1)*wpepbase*epepbase+wscpho*escpho+wpeppho*epeppho+ wcatnucl*ecation_nucl
829 etot=wsc*(evdw+ft(6)*evdw_t)+wscp*evdw2 &
830 +ft(1)*welec*(ees+evdw1) &
831 +wang*ebe+ft(1)*wtor*etors+wscloc*escloc &
832 +wstrain*ehpb+ft(3)*wcorr*ecorr+ft(4)*wcorr5*ecorr5 &
833 +ft(5)*wcorr6*ecorr6+ft(3)*wturn4*eello_turn4 &
834 +ft(2)*wturn3*eello_turn3 &
835 +ft(5)*wturn6*eello_turn6+ft(2)*wel_loc*eel_loc+edihcnstr &
836 +ft(2)*wtor_d*etors_d+ft(1)*wsccor*esccor &
837 +wbond*estr+wcatprot*ecation_prot+wcatcat*ecationcation&
838 +wbond_nucl*estr_nucl+wang_nucl*ebe_nucl&
839 +wvdwpp_nucl*evdwpp+welpp*eespp+wvdwpsb*evdwpsb+welpsb*eelpsb&
840 +wvdwsb*evdwsb+welsb*eelsb+wsbloc*esbloc+wtor_nucl*etors_nucl&
841 *ft(1)+wtor_d_nucl*ft(2)*etors_d_nucl+wcorr_nucl*ecorr_nucl &
842 +wcorr3_nucl*ecorr3_nucl&
844 +ft(1)*wpepbase*epepbase+wscpho*escpho+wpeppho*epeppho+ wcatnucl*ecation_nucl
848 write (iout,*) "WTF,",etot,potEmin_all(ib,iparm),entfac(i)/beta_h(ib,iparm)
849 etot=etot-entfac(i)/beta_h(ib,iparm)
850 if(etot.lt.potEmin_all(ib,iparm)) potEmin_all(ib,iparm)=etot
856 write (iout,*) "The potEmin array before reduction"
858 write (iout,*) "Parameter set",i
860 write (iout,*) j,PotEmin_all(j,i)
863 write (iout,*) "potEmin_min",potEmin_min
866 !C Determine the minimum energes for all parameter sets and temperatures
867 call MPI_AllReduce(potEmin_all(1,1),potEmin_t_all(1,1), &
868 maxT_h*nParmSet,MPI_DOUBLE_PRECISION,MPI_MIN,WHAM_COMM,IERROR)
871 potEmin_all(j,i)=potEmin_t_all(j,i)
875 potEmin_min=potEmin_all(1,1)
878 if (potEmin_all(j,i).lt.potEmin_min) &
879 potEmin_min=potEmin_all(j,i)
883 write (iout,*) "The potEmin array"
885 write (iout,*) "Parameter set",i
887 write (iout,*) j,1.0d0/(1.987d-3*beta_h(j,i)), &
891 write (iout,*) "potEmin_min",potEmin_min
903 write (iout,*) "--------------hist"
907 sumW_p(i,iparm)=0.0d0
908 sumE_p(i,iparm)=0.0d0
909 sumEbis_p(i,iparm)=0.0d0
910 sumEsq_p(i,iparm)=0.0d0
912 sumQ_p(j,i,iparm)=0.0d0
913 sumQsq_p(j,i,iparm)=0.0d0
914 sumEQ_p(j,i,iparm)=0.0d0
924 sumEbis(i,iparm)=0.0d0
925 sumEsq(i,iparm)=0.0d0
927 sumQ(j,i,iparm)=0.0d0
928 sumQsq(j,i,iparm)=0.0d0
929 sumEQ(j,i,iparm)=0.0d0
935 ! 8/26/05 entropy distribution
940 !! ent=-dlog(entfac(t))
942 ! if (ent.lt.entmin_p) entmin_p=ent
943 ! if (ent.gt.entmax_p) entmax_p=ent
945 ! write (iout,*) "entmin",entmin_p," entmax",entmax_p
946 !! write (iout,*) "entmin_p",entmin_p," entmax_p",entmax_p
948 ! call MPI_Allreduce(entmin_p,entmin,1,MPI_DOUBLE_PRECISION,MPI_MIN,&
950 ! call MPI_Allreduce(entmax_p,entmax,1,MPI_DOUBLE_PRECISION,MPI_MAX,&
952 ! write (iout,*) "entmin",entmin," entmax",entmax
953 ! write (iout,*) "entmin_p",entmin_p," entmax_p",entmax_p
954 ! ientmax=entmax-entmin
955 !iientmax=entmax-entmin !el
956 !write (iout,*) "ientmax",ientmax,entmax,entmin
957 !write (iout,*) "iientmax",iientmax
958 ! if (ientmax.gt.2000) ientmax=2000
959 ! write (iout,*) "entmin",entmin," entmax",entmax," ientmax",ientmax
962 !! ient=-dlog(entfac(t))-entmin
963 ! ient=entfac(t)-entmin
964 ! if (ient.le.2000) histent_p(ient)=histent_p(ient)+1
966 ! call MPI_Allreduce(histent_p(0),histent(0),ientmax+1,MPI_INTEGER,&
967 ! MPI_SUM,WHAM_COMM,IERROR)
968 ! if (me1.eq.Master) then
969 ! write (iout,*) "Entropy histogram"
971 ! write(iout,'(f15.4,i10)') entmin+i,histent(i)
977 ! do t=1,ntot(islice)
979 ! if (ent.lt.entmin) entmin=ent
980 ! if (ent.gt.entmax) entmax=ent
982 ! ientmax=-dlog(entmax)-entmin
983 ! if (ientmax.gt.2000) ientmax=2000
984 ! do t=1,ntot(islice)
985 ! ient=entfac(t)-entmin
986 ! if (ient.le.2000) histent(ient)=histent(ient)+1
988 ! write (iout,*) "Entropy histogram"
990 ! write(iout,'(2f15.4)') entmin+i,histent(i)
995 write (iout,*) "me1",me1," scount",scount(me1) !d
1021 hrmsrgy(j,i,ib)=0.0d0
1023 hrmsrgy_p(j,i,ib)=0.0d0
1035 hfin_ent_p(ind)=hfin_ent_p(ind)+dexp(entfac(t))
1037 hfin_ent(ind)=hfin_ent(ind)+dexp(entfac(t))
1039 ! write (iout,'(2i5,20f8.2)') "debug",t,t,(enetb(k,t,iparm),k=1,21)
1040 call restore_parm(iparm)
1041 ! evdw=enetb(21,t,iparm)
1042 evdw=enetb(20,t,iparm)
1043 evdw_t=enetb(1,t,iparm)
1045 ! evdw2_14=enetb(17,t,iparm)
1046 evdw2_14=enetb(18,t,iparm)
1047 evdw2=enetb(2,t,iparm)+evdw2_14
1049 evdw2=enetb(2,t,iparm)
1053 ees=enetb(3,t,iparm)
1054 evdw1=enetb(16,t,iparm)
1056 ees=enetb(3,t,iparm)
1059 ecorr=enetb(4,t,iparm)
1060 ecorr5=enetb(5,t,iparm)
1061 ecorr6=enetb(6,t,iparm)
1062 eel_loc=enetb(7,t,iparm)
1063 eello_turn3=enetb(8,t,iparm)
1064 eello_turn4=enetb(9,t,iparm)
1065 eello_turn6=enetb(10,t,iparm)
1066 ebe=enetb(11,t,iparm)
1067 escloc=enetb(12,t,iparm)
1068 etors=enetb(13,t,iparm)
1069 etors_d=enetb(14,t,iparm)
1070 ehpb=enetb(15,t,iparm)
1071 ! estr=enetb(18,t,iparm)
1072 estr=enetb(17,t,iparm)
1073 ! esccor=enetb(19,t,iparm)
1074 esccor=enetb(21,t,iparm)
1075 ! edihcnstr=enetb(20,t,iparm)
1076 edihcnstr=enetb(19,t,iparm)
1078 ecationcation=enetb(41,t,iparm)
1079 ecation_prot=enetb(42,t,iparm)
1080 evdwpp = enetb(26,t,iparm)
1081 eespp = enetb(27,t,iparm)
1082 evdwpsb = enetb(28,t,iparm)
1083 eelpsb = enetb(29,t,iparm)
1084 evdwsb = enetb(30,t,iparm)
1085 eelsb = enetb(31,t,iparm)
1086 estr_nucl = enetb(32,t,iparm)
1087 ebe_nucl = enetb(33,t,iparm)
1088 esbloc = enetb(34,t,iparm)
1089 etors_nucl = enetb(35,t,iparm)
1090 etors_d_nucl = enetb(36,t,iparm)
1091 ecorr_nucl = enetb(37,t,iparm)
1092 ecorr3_nucl = enetb(38,t,iparm)
1093 epeppho= enetb(49,t,iparm)
1094 escpho= enetb(48,t,iparm)
1095 epepbase= enetb(47,t,iparm)
1096 escbase= enetb(46,t,iparm)
1097 ecation_nucl=enetb(50,t,iparm)
1100 betaT=startGridT+k*delta_T
1102 !write(iout,*)"kkkkkkkk",betaT,startGridT,k,delta_T
1104 !d ft=2*T0/(T0+betaT)
1105 if (rescale_modeW.eq.1) then
1113 denom=kfacl-1.0d0+quotl
1115 ftprim(l)=-l*ft(l)*quotl1/(T0*denom)
1116 ftbis(l)=l*kfacl*quotl1* &
1117 (2*l*quotl-(l-1)*denom)/(quot*t0*t0*denom**3)
1120 ft(6)=(320.0d0+80.0d0*dtanh((betaT-320.0d0)/80.0d0))/ &
1122 ftprim(6)=1.0d0/(320.0d0*dcosh((betaT-320.0d0)/80.0d0)**2)
1123 ftbis(6)=-2.0d0*dtanh((betaT-320.0d0)/80.0d0) &
1124 /(320.0d0*80.0d0*dcosh((betaT-320.0d0)/80.0d0)**3)
1125 #elif defined(FUNCT)
1134 else if (rescale_modeW.eq.2) then
1142 logfac=1.0d0/dlog(eplus+eminus)
1143 tanhT=(eplus-eminus)/(eplus+eminus)
1144 fT(l)=1.12692801104297249644d0*logfac
1145 ftprim(l)=-l*quotl1*ft(l)*tanhT*logfac/T0
1146 ftbis(l)=(l-1)*ftprim(l)/(quot*T0)- &
1147 2*l*quotl1/T0*logfac* &
1148 (2*l*quotl1*ft(l)/(T0*(eplus+eminus)**2) &
1152 ft(6)=(320.0d0+80.0d0*dtanh((betaT-320.0d0)/80.0d0))/ &
1154 ftprim(6)=1.0d0/(320.0d0*dcosh((betaT-320.0d0)/80.0d0)**2)
1155 ftbis(6)=-2.0d0*dtanh((betaT-320.0d0)/80.0d0) &
1156 /(320.0d0*80.0d0*dcosh((betaT-320.0d0)/80.0d0)**3)
1157 #elif defined(FUNCT)
1166 else if (rescale_modeW.eq.0) then
1172 write (iout,*) "Error in WHAM_CALC: wrong RESCALE_MODE",&
1177 ! write (iout,*) "ftprim",ftprim
1178 ! write (iout,*) "ftbis",ftbis
1179 betaT=1.0d0/(1.987D-3*betaT)
1181 etot=wsc*(evdw+ft(6)*evdw_t)+wscp*evdw2+ft(1)*welec*ees &
1183 +wang*ebe+ft(1)*wtor*etors+wscloc*escloc &
1184 +wstrain*ehpb+ft(3)*wcorr*ecorr+ft(4)*wcorr5*ecorr5 &
1185 +ft(5)*wcorr6*ecorr6+ft(3)*wturn4*eello_turn4 &
1186 +ft(2)*wturn3*eello_turn3 &
1187 +ft(5)*wturn6*eello_turn6+ft(2)*wel_loc*eel_loc &
1188 +edihcnstr+ft(2)*wtor_d*etors_d+ft(1)*wsccor*esccor &
1189 +wbond*estr+wcatprot*ecation_prot+wcatcat*ecationcation &
1190 +wbond_nucl*estr_nucl+wang_nucl*ebe_nucl&
1191 +wvdwpp_nucl*evdwpp+welpp*eespp+wvdwpsb*evdwpsb+welpsb*eelpsb&
1192 +wvdwsb*evdwsb+welsb*eelsb+wsbloc*esbloc+wtor_nucl*etors_nucl&
1193 *ft(1)+wtor_d_nucl*ft(2)*etors_d_nucl+wcorr_nucl*ecorr_nucl &
1194 +wcorr3_nucl*ecorr3_nucl&
1196 +ft(1)*wpepbase*epepbase+wscpho*escpho+wpeppho*epeppho &
1197 + wcatnucl*ecation_nucl
1200 eprim=ftprim(6)*evdw_t+ftprim(1)*welec*ees &
1201 +ftprim(1)*wtor*etors+ &
1202 ftprim(3)*wcorr*ecorr+ftprim(4)*wcorr5*ecorr5+ &
1203 ftprim(5)*wcorr6*ecorr6+ftprim(3)*wturn4*eello_turn4+ &
1204 ftprim(2)*wturn3*eello_turn3+ftprim(5)*wturn6*eello_turn6+ &
1205 ftprim(2)*wel_loc*eel_loc+ftprim(2)*wtor_d*etors_d+ &
1206 ftprim(1)*wsccor*esccor +ftprim(1)*wtor_nucl*etors_nucl&
1207 +wtor_d_nucl*ftprim(2)*etors_d_nucl+ftprim(1)*wpepbase*epepbase
1208 ebis=ftbis(1)*welec*ees+ftbis(1)*wtor*etors+ &
1209 ftbis(3)*wcorr*ecorr+ftbis(4)*wcorr5*ecorr5+ &
1210 ftbis(5)*wcorr6*ecorr6+ftbis(3)*wturn4*eello_turn4+ &
1211 ftbis(2)*wturn3*eello_turn3+ftbis(5)*wturn6*eello_turn6+ &
1212 ftbis(2)*wel_loc*eel_loc+ftbis(2)*wtor_d*etors_d+ &
1213 ftbis(1)*wsccor*esccor+ftbis(1)*wtor_nucl*etors_nucl&
1214 +wtor_d_nucl*ftbis(2)*etors_d_nucl+ftbis(1)*wpepbase*epepbase
1216 etot=wsc*(evdw+ft(6)*evdw_t)+wscp*evdw2 &
1217 +ft(1)*welec*(ees+evdw1) &
1218 +wang*ebe+ft(1)*wtor*etors+wscloc*escloc &
1219 +wstrain*ehpb+ft(3)*wcorr*ecorr+ft(4)*wcorr5*ecorr5 &
1220 +ft(5)*wcorr6*ecorr6+ft(3)*wturn4*eello_turn4 &
1221 +ft(2)*wturn3*eello_turn3 &
1222 +ft(5)*wturn6*eello_turn6+ft(2)*wel_loc*eel_loc+edihcnstr &
1223 +ft(2)*wtor_d*etors_d+ft(1)*wsccor*esccor &
1224 +wbond*estr+wcatprot*ecation_prot+wcatcat*ecationcation&
1225 +wbond_nucl*estr_nucl+wang_nucl*ebe_nucl&
1226 +wvdwpp_nucl*evdwpp+welpp*eespp+wvdwpsb*evdwpsb+welpsb*eelpsb&
1227 +wvdwsb*evdwsb+welsb*eelsb+wsbloc*esbloc+wtor_nucl*etors_nucl&
1228 *ft(1)+wtor_d_nucl*ft(2)*etors_d_nucl+wcorr_nucl*ecorr_nucl &
1229 +wcorr3_nucl*ecorr3_nucl&
1231 +ft(1)*wpepbase*epepbase+wscpho*escpho+wpeppho*epeppho&
1232 + wcatnucl*ecation_nucl
1235 eprim=ftprim(6)*evdw_t+ftprim(1)*welec*(ees+evdw1) &
1236 +ftprim(1)*wtor*etors+ &
1237 ftprim(3)*wcorr*ecorr+ftprim(4)*wcorr5*ecorr5+ &
1238 ftprim(5)*wcorr6*ecorr6+ftprim(3)*wturn4*eello_turn4+ &
1239 ftprim(2)*wturn3*eello_turn3+ftprim(5)*wturn6*eello_turn6+ &
1240 ftprim(2)*wel_loc*eel_loc+ftprim(2)*wtor_d*etors_d+ &
1241 ftprim(1)*wsccor*esccor+ftprim(1)*wtor_nucl*etors_nucl&
1242 +wtor_d_nucl*ftprim(2)*etors_d_nucl+ftprim(1)*wpepbase*epepbase
1243 ebis=ftbis(1)*welec*(ees+evdw1)+ftbis(1)*wtor*etors+ &
1244 ftbis(3)*wcorr*ecorr+ftbis(4)*wcorr5*ecorr5+ &
1245 ftbis(5)*wcorr6*ecorr6+ftbis(3)*wturn4*eello_turn4+ &
1246 ftbis(2)*wturn3*eello_turn3+ftbis(5)*wturn6*eello_turn6+ &
1247 ftbis(2)*wel_loc*eel_loc+ftbis(2)*wtor_d*etors_d+ &
1248 ftbis(1)*wsccor*esccor+ftbis(1)*wtor_nucl*etors_nucl&
1249 +wtor_d_nucl*ftbis(2)*etors_d_nucl*ftbis(1)*wpepbase*epepbase
1252 weight=dexp(-betaT*(etot-potEmin)+entfac(t))
1254 write (iout,*) "iparm",iparm," t",t," betaT",betaT,&
1255 " etot",etot," entfac",entfac(t),&
1256 " weight",weight," ebis",ebis
1258 etot=etot-temper*eprim
1260 sumW_p(k,iparm)=sumW_p(k,iparm)+weight
1261 sumE_p(k,iparm)=sumE_p(k,iparm)+etot*weight
1262 sumEbis_p(k,iparm)=sumEbis_p(k,iparm)+ebis*weight
1263 sumEsq_p(k,iparm)=sumEsq_p(k,iparm)+etot**2*weight
1265 sumQ_p(j,k,iparm)=sumQ_p(j,k,iparm)+q(j,t)*weight
1266 sumQsq_p(j,k,iparm)=sumQsq_p(j,k,iparm)+q(j,t)**2*weight
1267 sumEQ_p(j,k,iparm)=sumEQ_p(j,k,iparm) &
1271 sumW(k,iparm)=sumW(k,iparm)+weight
1272 sumE(k,iparm)=sumE(k,iparm)+etot*weight
1273 sumEbis(k,iparm)=sumEbis(k,iparm)+ebis*weight
1274 sumEsq(k,iparm)=sumEsq(k,iparm)+etot**2*weight
1276 sumQ(j,k,iparm)=sumQ(j,k,iparm)+q(j,t)*weight
1277 sumQsq(j,k,iparm)=sumQsq(j,k,iparm)+q(j,t)**2*weight
1278 sumEQ(j,k,iparm)=sumEQ(j,k,iparm) &
1283 indE = aint(potE(t,iparm)-aint(potEmin))
1284 if (indE.ge.0 .and. indE.le.maxinde) then
1285 if (indE.gt.upindE_p) upindE_p=indE
1286 histE_p(indE)=histE_p(indE)+dexp(-entfac(t))
1290 potEmin=potEmin_all(ib,iparm)
1291 expfac=dexp(-beta_h(ib,iparm)*(etot-potEmin)+entfac(t))
1292 hfin_p(ind,ib)=hfin_p(ind,ib)+ &
1293 dexp(-beta_h(ib,iparm)*(etot-potEmin)+entfac(t))
1295 indrgy=dint((q(nQ+2,t)-rgymin)/deltrgy)
1296 indrms=dint((q(nQ+1,t)-rmsmin)/deltrms)
1297 hrmsrgy_p(indrgy,indrms,ib)= &
1298 hrmsrgy_p(indrgy,indrms,ib)+expfac
1303 potEmin=potEmin_all(ib,iparm)
1304 expfac=dexp(-beta_h(ib,iparm)*(etot-potEmin)+entfac(t))
1305 hfin(ind,ib)=hfin(ind,ib)+ &
1306 dexp(-beta_h(ib,iparm)*(etot-potEmin)+entfac(t))
1308 indrgy=dint((q(nQ+2,t)-rgymin)/deltrgy)
1309 indrms=dint((q(nQ+1,t)-rmsmin)/deltrms)
1310 hrmsrgy(indrgy,indrms,ib)= &
1311 hrmsrgy(indrgy,indrms,ib)+expfac
1317 if (histout) call MPI_Reduce(hfin_p(0,ib),hfin(0,ib),nbin,&
1318 MPI_DOUBLE_PRECISION,MPI_SUM,Master,WHAM_COMM,IERROR)
1320 call MPI_Reduce(hrmsrgy_p(0,0,ib),hrmsrgy(0,0,ib),&
1321 (MaxBinRgy+1)*(nbin_rms+1),MPI_DOUBLE_PRECISION,MPI_SUM,Master,&
1325 call MPI_Reduce(upindE_p,upindE,1,&
1326 MPI_INTEGER,MPI_MAX,Master,WHAM_COMM,IERROR)
1327 call MPI_Reduce(histE_p(0),histE(0),maxindE,&
1328 MPI_DOUBLE_PRECISION,MPI_SUM,Master,WHAM_COMM,IERROR)
1330 if (me1.eq.master) then
1334 write (iout,'(6x,$)')
1335 write (iout,'(f20.2,$)') (1.0d0/(1.987D-3*beta_h(ib,iparm)),&
1339 write (iout,'(/a)') 'Final histograms'
1341 if (nslice.eq.1) then
1342 if (separate_parset) then
1343 write(licz3,"(bz,i3.3)") myparm
1344 histname=prefix(:ilen(prefix))//'_par'//licz3//'.hist'
1346 histname=prefix(:ilen(prefix))//'.hist'
1349 if (separate_parset) then
1350 write(licz3,"(bz,i3.3)") myparm
1351 histname=prefix(:ilen(prefix))//'_par'//licz3// &
1352 '_slice_'//licz2//'.hist'
1354 histname=prefix(:ilen(prefix))//'_slice_'//licz2//'.hist'
1357 #if defined(AIX) || defined(PGI)
1358 open (ihist,file=histname,position='append')
1360 open (ihist,file=histname,access='append')
1368 sumH=sumH+hfin(t,ib)
1370 if (sumH.gt.0.0d0) then
1372 jj = mod(liczbaW,nbin1)
1373 liczbaW=liczbaW/nbin1
1374 write (iout,'(f6.3,$)') dmin+(jj+0.5d0)*delta
1376 write (ihist,'(f6.3,$)') dmin+(jj+0.5d0)*delta
1379 write (iout,'(e20.10,$)') hfin(t,ib)
1380 if (histfile) write (ihist,'(e20.10,$)') hfin(t,ib)
1382 write (iout,'(i5)') iparm
1383 if (histfile) write (ihist,'(i5)') iparm
1390 if (nslice.eq.1) then
1391 if (separate_parset) then
1392 write(licz3,"(bz,i3.3)") myparm
1393 histname=prefix(:ilen(prefix))//"_par"//licz3//'.ent'
1395 histname=prefix(:ilen(prefix))//'.ent'
1398 if (separate_parset) then
1399 write(licz3,"(bz,i3.3)") myparm
1400 histname=prefix(:ilen(prefix))//'par_'//licz3// &
1401 '_slice_'//licz2//'.ent'
1403 histname=prefix(:ilen(prefix))//'_slice_'//licz2//'.ent'
1406 #if defined(AIX) || defined(PGI)
1407 open (ihist,file=histname,position='append')
1409 open (ihist,file=histname,access='append')
1411 write (ihist,'(a)') "# Microcanonical entropy"
1413 write (ihist,'(f8.0,$)') dint(potEmin)+i
1414 if (histE(i).gt.0.0e0) then
1415 write (ihist,'(f15.5,$)') dlog(histE(i))
1417 write (ihist,'(f15.5,$)') 0.0d0
1423 write (iout,*) "Microcanonical entropy"
1425 write (iout,'(f8.0,$)') dint(potEmin)+i
1426 if (histE(i).gt.0.0e0) then
1427 write (iout,'(f15.5,$)') dlog(histE(i))
1429 write (iout,'(f15.5,$)') 0.0d0
1434 if (nslice.eq.1) then
1435 if (separate_parset) then
1436 write(licz3,"(bz,i3.3)") myparm
1437 histname=prefix(:ilen(prefix))//'_par'//licz3//'.rmsrgy'
1439 histname=prefix(:ilen(prefix))//'.rmsrgy'
1442 if (separate_parset) then
1443 write(licz3,"(bz,i3.3)") myparm
1444 histname=prefix(:ilen(prefix))//'_par'//licz3// &
1445 '_slice_'//licz2//'.rmsrgy'
1447 histname=prefix(:ilen(prefix))//'_slice_'//licz2//'.rmsrgy'
1450 #if defined(AIX) || defined(PGI)
1451 open (ihist,file=histname,position='append')
1453 open (ihist,file=histname,access='append')
1457 write(ihist,'(2f8.2,$)') &
1458 rgymin+deltrgy*j,rmsmin+deltrms*i
1460 if (hrmsrgy(j,i,ib).gt.0.0d0) then
1461 write(ihist,'(e14.5,$)') &
1462 -dlog(hrmsrgy(j,i,ib))/beta_h(ib,iparm) &
1465 write(ihist,'(e14.5,$)') 1.0d6
1468 write (ihist,'(i2)') iparm
1476 call MPI_Reduce(hfin_ent_p(0),hfin_ent(0),nbin,&
1477 MPI_DOUBLE_PRECISION,MPI_SUM,Master,WHAM_COMM,IERROR)
1478 call MPI_Reduce(sumW_p(0,1),sumW(0,1),(nGridT+1)*nParmSet,&
1479 MPI_DOUBLE_PRECISION,MPI_SUM,Master,WHAM_COMM,IERROR)
1480 call MPI_Reduce(sumE_p(0,1),sumE(0,1),(nGridT+1)*nParmSet,&
1481 MPI_DOUBLE_PRECISION,MPI_SUM,Master,WHAM_COMM,IERROR)
1482 call MPI_Reduce(sumEbis_p(0,1),sumEbis(0,1),(nGridT+1)*nParmSet,&
1483 MPI_DOUBLE_PRECISION,MPI_SUM,Master,WHAM_COMM,IERROR)
1484 call MPI_Reduce(sumEsq_p(0,1),sumEsq(0,1),(nGridT+1)*nParmSet,&
1485 MPI_DOUBLE_PRECISION,MPI_SUM,Master,WHAM_COMM,IERROR)
1486 call MPI_Reduce(sumQ_p(1,0,1),sumQ(1,0,1),&
1487 MaxQ1*(nGridT+1)*nParmSet,MPI_DOUBLE_PRECISION,MPI_SUM,Master,&
1489 call MPI_Reduce(sumQsq_p(1,0,1),sumQsq(1,0,1),&
1490 MaxQ1*(nGridT+1)*nParmSet,MPI_DOUBLE_PRECISION,MPI_SUM,Master,&
1492 call MPI_Reduce(sumEQ_p(1,0,1),sumEQ(1,0,1),&
1493 MaxQ1*(nGridT+1)*nParmSet,MPI_DOUBLE_PRECISION,MPI_SUM,Master,&
1495 if (me.eq.master) then
1497 write (iout,'(/a)') 'Thermal characteristics of folding'
1498 if (nslice.eq.1) then
1501 nazwa=prefix(:ilen(prefix))//"_slice_"//licz2
1504 if (nparmset.eq.1 .and. .not.separate_parset) then
1505 nazwa=nazwa(:iln)//".thermal"
1506 else if (nparmset.eq.1 .and. separate_parset) then
1507 write(licz3,"(bz,i3.3)") myparm
1508 nazwa=nazwa(:iln)//"_par_"//licz3//".thermal"
1511 if (nparmset.gt.1) then
1512 write(licz3,"(bz,i3.3)") iparm
1513 nazwa=nazwa(:iln)//"_par_"//licz3//".thermal"
1516 if (separate_parset) then
1517 write (iout,'(a,i3)') "Parameter set",myparm
1519 write (iout,'(a,i3)') "Parameter set",iparm
1522 betaT=1.0d0/(1.987D-3*(startGridT+i*delta_T))
1523 if (betaT.ge.beta_h(1,iparm)) then
1524 potEmin=potEmin_all(1,iparm)
1525 else if (betaT.lt.beta_h(nT_h(iparm),iparm)) then
1526 potEmin=potEmin_all(nT_h(iparm),iparm)
1528 do l=1,nT_h(iparm)-1
1529 if (betaT.le.beta_h(l,iparm) .and. &
1530 betaT.gt.beta_h(l+1,iparm)) then
1531 potEmin=potEmin_all(l,iparm)
1537 sumE(i,iparm)=sumE(i,iparm)/sumW(i,iparm)
1538 sumEbis(i,iparm)=(startGridT+i*delta_T)*sumEbis(i,iparm)/ &
1540 sumEsq(i,iparm)=(sumEsq(i,iparm)/sumW(i,iparm) &
1541 -sumE(i,iparm)**2)/(1.987D-3*(startGridT+i*delta_T)**2)
1543 sumQ(j,i,iparm)=sumQ(j,i,iparm)/sumW(i,iparm)
1544 sumQsq(j,i,iparm)=sumQsq(j,i,iparm)/sumW(i,iparm) &
1546 sumEQ(j,i,iparm)=sumEQ(j,i,iparm)/sumW(i,iparm) &
1547 -sumQ(j,i,iparm)*sumE(i,iparm)
1549 sumW(i,iparm)=-dlog(sumW(i,iparm))*(1.987D-3* &
1550 (startGridT+i*delta_T))+potEmin
1551 write (iout,'(f7.1,2f15.5,$)') startGridT+i*delta_T,&
1552 sumW(i,iparm),sumE(i,iparm)
1553 write (iout,'(f10.5,$)') (sumQ(j,i,iparm),j=1,nQ+2)
1554 write (iout,'(e15.5,$)') sumEsq(i,iparm)-sumEbis(i,iparm),&
1555 (sumQsq(j,i,iparm),j=1,nQ+2),(sumEQ(j,i,iparm),j=1,nQ+2)
1557 write (34,'(f7.1,2f15.5,$)') startGridT+i*delta_T,&
1558 sumW(i,iparm),sumE(i,iparm)
1559 write (34,'(f10.5,$)') (sumQ(j,i,iparm),j=1,nQ+2)
1560 write (34,'(e15.5,$)') sumEsq(i,iparm)-sumEbis(i,iparm),&
1561 (sumQsq(j,i,iparm),j=1,nQ+2),(sumEQ(j,i,iparm),j=1,nQ+2)
1569 if (hfin_ent(t).gt.0.0d0) then
1571 jj = mod(liczbaW,nbin1)
1572 write (iout,'(f6.3,e20.10," ent")') dmin+(jj+0.5d0)*delta,&
1574 if (histfile) write (ihist,'(f6.3,e20.10," ent")') &
1575 dmin+(jj+0.5d0)*delta,&
1579 if (histfile) close(ihist)
1583 ! Write data for zscore
1584 if (nslice.eq.1) then
1585 zscname=prefix(:ilen(prefix))//".zsc"
1587 zscname=prefix(:ilen(prefix))//"_slice_"//licz2//".zsc"
1589 #if defined(AIX) || defined(PGI)
1590 open (izsc,file=prefix(:ilen(prefix))//'.zsc',position='append')
1592 open (izsc,file=prefix(:ilen(prefix))//'.zsc',access='append')
1594 write (izsc,'("NQ=",i1," NPARM=",i1)') nQ,nParmSet
1596 write (izsc,'("NT=",i1)') nT_h(iparm)
1598 write (izsc,'("TEMP=",f6.1," NR=",i2," SNK=",$)') &
1599 1.0d0/(beta_h(ib,iparm)*1.987D-3),nR(ib,iparm)
1600 jj = min0(nR(ib,iparm),7)
1601 write (izsc,'(i8,$)') (snk(i,ib,iparm,islice),i=1,jj)
1602 write (izsc,'(a1,$)') (" ",i=22+8*jj+1,79)
1603 write (izsc,'("&")')
1604 if (nR(ib,iparm).gt.7) then
1605 do ii=8,nR(ib,iparm),9
1606 jj = min0(nR(ib,iparm),ii+8)
1607 write (izsc,'(i8,$)') (snk(i,ib,iparm,islice),i=ii,jj)
1608 write (izsc,'(a1,$') (" ",i=(jj-ii+1)*8+1,79)
1609 write (izsc,'("&")')
1612 write (izsc,'("FI=",$)')
1613 jj=min0(nR(ib,iparm),7)
1614 write (izsc,'(f10.5,$)') (fi(i,ib,iparm),i=1,jj)
1615 write (izsc,'(a1,$)') (" ",i=3+10*jj+1,79)
1616 write (izsc,'("&")')
1617 if (nR(ib,iparm).gt.7) then
1618 do ii=8,nR(ib,iparm),9
1619 jj = min0(nR(ib,iparm),ii+8)
1620 write (izsc,'(f10.5,$)') (fi(i,ib,iparm),i=ii,jj)
1621 if (jj.eq.nR(ib,iparm)) then
1624 write (izsc,'(a1,$)') (" ",i=10*(jj-ii+1)+1,79)
1625 write (izsc,'(t80,"&")')
1630 write (izsc,'("KH=",$)')
1631 write (izsc,'(f7.2,$)') (Kh(j,i,ib,iparm),j=1,nQ)
1632 write (izsc,'(" Q0=",$)')
1633 write (izsc,'(f7.5,$)') (q0(j,i,ib,iparm),j=1,nQ)
1644 end subroutine WHAMCALC
1645 !-----------------------------------------------------------------------------
1646 end module wham_calc