1 ********************************************************************************
2 * Settings for the program of united-residue peptide simulation in real space *
4 * ------- As of 6/23/01 ----------- *
6 ********************************************************************************
7 C Max. number of processors.
9 parameter (maxprocs=2048)
10 C Max. number of fine-grain processors
12 c parameter (max_fg_procs=maxprocs)
13 parameter (max_fg_procs=512)
14 C Max. number of coarse-grain processors
16 parameter (max_cg_procs=maxprocs)
17 C Max. number of AA residues
19 parameter (maxres=800)
20 C Appr. max. number of interaction sites
21 integer maxres2,maxres6,mmaxres2
22 parameter (maxres2=2*maxres,maxres6=6*maxres)
23 parameter (mmaxres2=(maxres2*(maxres2+1)/2))
24 C Max. number of variables
26 parameter (maxvar=6*maxres)
27 C Max. number of groups of interactions that a given SC is involved in
29 parameter (maxint_gr=2)
30 C Max. number of derivatives of virtual-bond and side-chain vectors in theta
33 parameter (maxdim=(maxres-1)*(maxres-2)/2)
34 C Max. number of SC contacts
36 parameter (maxcont=12*maxres)
37 C Max. number of contacts per residue
39 parameter (maxconts=maxres/4)
40 c parameter (maxconts=50)
41 C Number of AA types (at present only natural AA's will be handled
43 parameter (ntyp=20,ntyp1=ntyp+1)
44 C Max. number of types of dihedral angles & multiplicity of torsional barriers
45 C and the number of terms in double torsionals
46 integer maxtor,maxterm,maxlor,maxtermd_1,maxtermd_2
47 parameter (maxtor=4,maxterm=10,maxlor=3,maxtermd_1=8,maxtermd_2=8)
48 C Max. number of residue types and parameters in expressions for
49 C virtual-bond angle bending potentials
50 integer maxthetyp,maxthetyp1,maxtheterm,maxtheterm2,maxtheterm3,
51 & maxsingle,maxdouble,mmaxtheterm
52 parameter (maxthetyp=3,maxthetyp1=maxthetyp+1,maxtheterm=20,
53 & maxtheterm2=6,maxtheterm3=4,maxsingle=6,maxdouble=4,
54 & mmaxtheterm=maxtheterm)
55 c Max number of torsional terms in SCCOR
57 parameter (maxterm_sccor=6)
58 C Max. number of lobes in SC distribution
61 C Max. number of S-S bridges
64 C Max. number of dihedral angle constraints
66 parameter (maxdih_constr=maxres)
67 C Max. number of patterns in the pattern database
70 C Max. number of residues in a peptide in the database
72 parameter (maxres_base=10)
73 C Max. number of threading attempts
75 parameter (maxthread=20)
76 C Max. number of move types in MCM
78 parameter (maxmovetype=4)
79 C Max. number of stored confs. in MC/MCM simulation
81 parameter (maxsave=20)
82 C Max. number of energy intervals
84 parameter (max_ene=10)
85 C Max. number of conformations in Master's cache array
87 parameter (max_cache=10)
88 C Max. number of conformations in the pool
90 parameter (max_pool=10)
91 C Number of energy components
93 parameter (n_ene=23,n_ene2=2*n_ene)
94 C Number of threads in deformation
95 integer max_thread,max_thread2
96 parameter (max_thread=4,max_thread2=2*max_thread)
97 C Number of structures to compare at t=0
98 integer max_threadss,max_threadss2
99 parameter (max_threadss=8,max_threadss2=2*max_threadss)
100 C Maxmimum number of angles per residue
103 C Maximum number of groups of angles
105 parameter (mxgr=2*maxres)
106 C Maximum number of chains
109 C Maximum number of generated conformations
112 C Maximum number of n7 generated conformations
115 C Maximum number of moves (n1-n8)
118 C Maximum number of seed
120 parameter (max_seed=1)
121 C Maximum number of timesteps for which stochastic MD matrices can be stored
122 integer maxflag_stoch
123 parameter (maxflag_stoch=0)
124 C Maximum number of backbone fragments in restraining
126 parameter (maxfrag_back=4)
127 C Maximum number of SC local term fitting function coefficiants
129 parameter (maxsccoef=65)
130 C Maximum number of terms in SC bond-stretching potential
132 parameter (maxbondterm=3)
133 C Maximum number of conformation stored in cache on each CPU before sending
134 C to master; depends on nstex / ntwx ratio
135 integer max_cache_traj
136 parameter (max_cache_traj=10)
137 C Nose-Hoover chain - chain length and order of Yoshida algorithm
138 integer maxmnh,maxyosh
139 parameter(maxmnh=10,maxyosh=5)