CDash : UNRES

Site Name: dell15
Build Name: Linux-gfortan-MPI GAB (view notes)
Stamp: 20230528-2203-Nightly (related builds)
Time: 2023-05-29T03:05:08 CEST
Type: Nightly

OS Name: Linux
OS Platform: x86_64
OS Release: 3.13.0-170-generic
OS Version: #220-Ubuntu SMP Thu May 9 12:40:49 UTC 2019
Compiler Version: unknown
CTest version: ctest-2.8.12.2

Current Build
Stage	Errors	Warnings
Update	0	0
Configure	0	0
Build	0	50
Test	0	0

Previous Build
Stage	Errors	Warnings
Update	0	0
Configure	0	0
Build	0	50
Test	0	0

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Stage: Update (0 errors, 0 warnings)

Start Time: 2023-05-29T03:05:01 CEST
End Time: 2023-05-29T03:05:06 CEST
Update Command: "/usr/bin/git" "fetch"
Update Type: GIT
Number of Updates: 0

Configure (0 errors, 0 warnings)

Start Time: 2023-05-29T03:05:06 CEST
End Time: 2023-05-29T03:05:06 CEST
Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_Fortran_COMPILER=gfortran -DUNRES_MD_FF=GAB -DUNRES_CSA_FF=GAB -DUNRES_WITH_MPI=1 "-GUnix Makefiles" "/tmp/cdash/source"
Configure Return Value: 0
Configure Output:

-- The Fortran compiler identification is GNU
-- The C compiler identification is GNU 4.8.4
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
MPI found
MPI_Fortran_INCLUDE_PATH
/users/local/mpich2-1.4.1p1_gnu/include -I/users/local/mpich2-1.4.1p1_gnu/include
MPI_Fortran_LIBRARIES
/users/local/mpich2-1.4.1p1_gnu/lib/libmpichf90.so/users/local/mpich2-1.4.1p1_gnu/lib/libmpichf90.so/users/local/mpich2-1.4.1p1_gnu/lib/libmpich.so/users/local/mpich2-1.4.1p1_gnu/lib/libopa.so/users/local/mpich2-1.4.1p1_gnu/lib/libmpl.so/usr/lib/x86_64-linux-gnu/librt.so/usr/lib/x86_64-linux-gnu/libpthread.so
Detected 64-bit architecture
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/build

View Configure Summary

Build (0 errors, 50 warnings)

Build command: /usr/bin/make -i -j4
Start Time: 2023-05-29T03:05:08 CEST
End Time: 2023-05-29T03:05:50 CEST

View Errors Summary

Build Warnings (50)

Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/convert.f.o
Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/checkder_p.F.o
Linking C static library libxdrf.a
[  3%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/fitsq.f.o
[  3%] Built target xdrf
[  3%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/geomout.F.o
/tmp/cdash/source/source/cluster/unres/src/geomout.F:166.38:

  180 format (I5,2F12.3,I2,8(1X,2I3,$))                                 
                                      1

Warning: $ should be the last specifier in format at (1)

/tmp/cdash/source/source/cluster/unres/src/geomout.F:167.29:

  190 format (3X,11(1X,2I3,$))                                          
                             1

Warning: $ should be the last specifier in format at (1)

[  4%] Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/convert.f.o
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Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/econstr_local.F.o
[  5%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/initialize.f.o
[  5%] [  5%] Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/gen_rand_conf.F.o
Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/geomout_min.F.o
[  5%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/intcor.f.o
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[  6%] Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/initialize_p.F.o

Build Log line 93

File: /tmp/cdash/build/Warning: DO loop at Line: 1

Scanning dependencies of target UNRES_BIN-MD-M
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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1728.15:

       do i=1,0                                                         
               1

Warning: DO loop at (1) will be executed zero times

/tmp/cdash/source/source/unres/src_CSA/dfa.F:1077.26:

      call sheetforce(nca,wshet)                                        
                          1

Warning: Actual argument contains too few elements for dummy argument 'wshet' (360000/640000) at (1)

/tmp/cdash/source/source/unres/src_CSA/dfa.F:1016.20:

      common /sheca/     bx,by,bz                                       
                    1

Warning: Named COMMON block 'sheca' at (1) shall be of the same size as elsewhere (14400 vs 19200 bytes)

/tmp/cdash/source/source/unres/src_CSA/dfa.F:1017.19:

      common /shee/      vbeta,vbet,vbetp,vbetm                         
                   1

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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1019.19:

      common /shef/      shefx, shefy, shefz                            
                   1

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/tmp/cdash/source/source/unres/src_CSA/dfa.F:1018.20:

      common /shetf/     shetfx,shetfy,shetfz                           
                    1

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[ 14%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/bank.F.o
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/tmp/cdash/source/source/unres/src_CSA/energy_p_new_barrier.F:6447.28:

      common /przechowalnia/ zapas                                      
                            1

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[ 22%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/contact.f.o
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      common /przechowalnia/ zapas                                      
                            1

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[ 22%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/dihed_cons.F.o
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      common /przechowalnia/ iturn3_start_all(0:max_fg_procs),          
                            1

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/tmp/cdash/source/source/unres/src_MD-M/initialize_p.F:293.28:

      common /przechowalnia/ iturn3_start_all(0:max_fg_procs),          
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (7438360 vs 5337112 bytes)

/tmp/cdash/source/source/unres/src_MD/initialize_p.F: In function ‘init_int_table’:

Build Log line 220

File: source/unres/src_MD/initialize_p.F Line: 672

/tmp/cdash/source/source/unres/src_MD/initialize_p.F:672:0: warning: iteration 512 invokes undefined behavior [-Waggressive-loop-optimizations]

             ielstart_all(j,i)=0
 ^

Build Log line 223

File: source/unres/src_MD/initialize_p.F Line: 670

/tmp/cdash/source/source/unres/src_MD/initialize_p.F:670:0: note: containing loop

         do i=0,maxprocs-1
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[ 31%] Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/indexx.f.o
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/tmp/cdash/source/source/unres/src_MD-M/initialize_p.F: In function ‘init_int_table’:

Build Log line 229

File: source/unres/src_MD-M/initialize_p.F Line: 672

/tmp/cdash/source/source/unres/src_MD-M/initialize_p.F:672:0: warning: iteration 512 invokes undefined behavior [-Waggressive-loop-optimizations]

             ielstart_all(j,i)=0
 ^

Build Log line 232

File: source/unres/src_MD-M/initialize_p.F Line: 670

/tmp/cdash/source/source/unres/src_MD-M/initialize_p.F:670:0: note: containing loop

         do i=0,maxprocs-1
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[ 31%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/intcor.f.o
/tmp/cdash/source/source/unres/src_CSA/initialize_p.F:296.28:

      common /przechowalnia/ iturn3_start_all(0:max_fg_procs),          
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[ 32%] Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/intcartderiv.F.o
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/tmp/cdash/source/source/unres/src_CSA/initialize_p.F: In function ‘init_int_table’:

Build Log line 244

File: source/unres/src_CSA/initialize_p.F Line: 672

/tmp/cdash/source/source/unres/src_CSA/initialize_p.F:672:0: warning: iteration 512 invokes undefined behavior [-Waggressive-loop-optimizations]

             ielstart_all(j,i)=0
 ^

Build Log line 247

File: source/unres/src_CSA/initialize_p.F Line: 670

/tmp/cdash/source/source/unres/src_CSA/initialize_p.F:670:0: note: containing loop

         do i=0,maxprocs-1
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COMMON.LANGEVIN.lang0:6.23:
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      common /langforc/ friction,stochforc,                             
                       1

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      common /gucio/ cm,energia_short                                   
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      common /gucio/ cm                                                 
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      common /gucio/ cm                                                 
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      common /langforc/ friction,stochforc,                             
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      common /przechowalnia/ d_restart1                                 
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      common /przechowalnia/ d_restart1                                 
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      common /syfek/ gamvec                                             
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  180 format (I5,2F12.3,I2,$,8(1X,2I3,$))                               
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  180 format (I5,2F12.3,I2,$,8(1X,2I3,$))                               
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  190 format (3X,11(1X,2I3,$))                                          
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                  1

Warning: Padding of 4 bytes required before 'energy' in COMMON 'clu' at (1); reorder elements or use -fno-align-commons

[ 95%] [ 95%] [ 95%] [ 95%] Building Fortran object source/xdrfpdb/src-M/CMakeFiles/UNRES_XDRF2PDB_BIN-M.dir/misc.f.o
Building Fortran object source/cluster/wham/src-M/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/read_coords.F.o
Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/contfunc.f.o
Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/cont_frag.f.o
COMMON.CLUSTER:8.18:
    Included at /tmp/cdash/source/source/cluster/wham/src-M/read_coords.F:556:

      common /clu/ diss(maxdist),energy(0:maxconf),                     
                  1
Warning: Padding of 4 bytes required before 'energy' in COMMON 'clu' at (1); reorder elements or use -fno-align-commons
The maximum number of reported warnings or errors has been reached!!!

View Warnings Summary

Test (9 passed, 0 failed, 0 not run)

View Tests Summary