Site Name: dell15 Build Name: homology Linux-pgi-MPI E0LL2Y
(view notes)
Stamp: 20200616-2203-Nightly
(related builds)
Time: 2020-06-17T04:29:41 CEST Type: Nightly
OS Name: Linux OS Platform: x86_64 OS Release: 3.13.0-170-generic OS Version: #220-Ubuntu SMP Thu May 9 12:40:49 UTC 2019 Compiler Version: unknown CTest version: ctest-2.8.12.2
Start Time: 2020-06-17T04:29:38 CEST End Time: 2020-06-17T04:29:38 CEST Update Command: "/usr/bin/git" "fetch" Update Type: GIT Number of Updates: 0
Configure (0 errors, 0 warnings)
Start Time: 2020-06-17T04:29:38 CEST End Time: 2020-06-17T04:29:38 CEST Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DUNRES_MD_FF=E0LL2Y -DUNRES_DFA=1 -DUNRES_WITH_MPI=1 -DUNRES_MPIRUN=1 -DCMAKE_Fortran_COMPILER=pgf90 "-GUnix Makefiles" "/tmp/cdash/homology/source" Configure Return Value: 0 Configure Output:
-- The Fortran compiler identification is PGI
-- The C compiler identification is GNU 4.8.4
-- Check for working Fortran compiler: /opt/pgi/linux86-64/19.10/bin/pgf90
-- Check for working Fortran compiler: /opt/pgi/linux86-64/19.10/bin/pgf90 -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /opt/pgi/linux86-64/19.10/bin/pgf90 supports Fortran 90
-- Checking whether /opt/pgi/linux86-64/19.10/bin/pgf90 supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
MPI found
Detected 64-bit architecture
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/homology/build
Build command: /usr/bin/make -i -j4 Start Time: 2020-06-17T04:29:41 CEST End Time: 2020-06-17T04:33:05 CEST
0 inform, 0 warnings, 1 severes, 0 fatal for generator
Scanning dependencies of target xdrf
Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/arcos.f.o
[ 1%] Linking Fortran executable ../../bin/generator
[ 1%] Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/arcos.f.o
pgf90-Warning--Mipa is not supported for this target
pgf90-Warning--Mipa is not supported for this target
Building C object source/lib/xdrf/CMakeFiles/xdrf.dir/libxdrf.c.o
/usr/bin/ld: cannot find CMakeFiles/UNRES_DOCK_BIN.dir/generator.f.o: No such file or directory
pgf90-Warning--Mipa is not supported for this target
[ 1%] Built target UNRES_DOCK_BIN
[ 1%] [ 1%] [ 1%] Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/cartder.F.o
Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/banach.f.o
Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/bank.F.o
pgf90-Warning--Mipa is not supported for this target
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[ 53%] Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/isnan_pgi.f.o
pgf90-Warning--Mipa is not supported for this target
[ 53%] Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/cinfo.f.o
pgf90-Warning--Mipa is not supported for this target
Linking Fortran executable ../../../bin/unresCSA_pgf90_MPI_E0LL2Y.exe
pgf90-Warning--Mipa is not supported for this target
/usr/bin/ld: cannot find CMakeFiles/UNRES_BIN-CSA.dir/dfa.F.o: No such file or directory
[ 53%] Built target UNRES_BIN-CSA
Scanning dependencies of target UNRES_WHAM_M_BIN
[ 53%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/wham_multparm.F.o
pgf90-Warning--Mipa is not supported for this target
[ 54%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/readrtns_compar.F.o
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[ 54%] [ 54%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/readpdb.F.o
Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/bxread.F.o
/usr/bin/ld: cannot find CMakeFiles/UNRES_BIN-MD.dir/dfa.F.o: No such file or directory
pgf90-Warning--Mipa is not supported for this target
[ 62%] Built target UNRES_BIN-MD
[ 62%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/cinfo.f.o
Scanning dependencies of target UNRES_CLUSTER_WHAM_BIN
pgf90-Warning--Mipa is not supported for this target
[ 62%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/arcos.f.o
pgf90-Warning--Mipa is not supported for this target
[ 62%] Building C object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/proc_proc.c.o
[ 62%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/timing.F.o
pgf90-Warning--Mipa is not supported for this target
Linking Fortran executable ../../../bin/wham_pgf90_MPI_E0LL2Y.exe
pgf90-Warning--Mipa is not supported for this target
/usr/bin/ld: cannot find CMakeFiles/UNRES_WHAM_BIN.dir/dfa.F.o: No such file or directory
[ 62%] Built target UNRES_WHAM_BIN
[ 62%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/cartprint.f.o
pgf90-Warning--Mipa is not supported for this target
Scanning dependencies of target UNRES_CLUSTER_WHAM_M_BIN
[ 62%] Building Fortran object source/cluster/wham/src-M/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/arcos.f.o
[ 62%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/chainbuild.f.o
pgf90-Warning--Mipa is not supported for this target
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[ 86%] Building C object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/proc_proc.c.o
[ 86%] Linking Fortran executable ../../../../bin/cluster_wham_pgf90_MPI_E0LL2Y.exe
[ 87%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/define_pairs.f.o
pgf90-Warning--Mipa is not supported for this target
Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/chainbuild.f.o
pgf90-Warning--Mipa is not supported for this target
/usr/bin/ld: cannot find CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/dfa.F.o: No such file or directory
pgf90-Warning--Mipa is not supported for this target
[ 87%] Built target UNRES_CLUSTER_WHAM_BIN
[ 88%] Scanning dependencies of target xdrf2ang
[ 88%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/mysort.f.o
pgf90-Warning--Mipa is not supported for this target
[ 88%] Building Fortran object source/cluster/wham/src-M/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/timing.F.o
Building Fortran object source/xdrfpdb/src/CMakeFiles/xdrf2ang.dir/xdrf2ang.f.o
pgf90-Warning--Mipa is not supported for this target