Site Name: dell15 Build Name: devel Linux-pgi-MPI-DFA NEWCORR
(view notes)
Stamp: 20200612-2203-Nightly
(related builds)
Time: 2020-06-13T04:55:04 CEST Type: Nightly
OS Name: Linux OS Platform: x86_64 OS Release: 3.13.0-170-generic OS Version: #220-Ubuntu SMP Thu May 9 12:40:49 UTC 2019 Compiler Version: unknown CTest version: ctest-2.8.12.2
Start Time: 2020-06-13T04:55:03 CEST End Time: 2020-06-13T04:55:03 CEST Update Command: "/usr/bin/git" "fetch" Update Type: GIT Number of Updates: 0
Configure (0 errors, 0 warnings)
Start Time: 2020-06-13T04:55:03 CEST End Time: 2020-06-13T04:55:03 CEST Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DUNRES_MD_FF=NEWCORR -DUNRES_DFA=1 -DUNRES_WITH_MPI=1 -DUNRES_MPIRUN=1 -DCMAKE_Fortran_COMPILER=pgf90 "-GUnix Makefiles" "/tmp/cdash/devel/source" Configure Return Value: 0 Configure Output:
-- The Fortran compiler identification is PGI
-- The C compiler identification is GNU 4.8.4
-- Check for working Fortran compiler: /opt/pgi/linux86-64/19.10/bin/pgf90
-- Check for working Fortran compiler: /opt/pgi/linux86-64/19.10/bin/pgf90 -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /opt/pgi/linux86-64/19.10/bin/pgf90 supports Fortran 90
-- Checking whether /opt/pgi/linux86-64/19.10/bin/pgf90 supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
MPI found
Detected 64-bit architecture
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/devel/build
Build command: /usr/bin/make -i -j4 Start Time: 2020-06-13T04:55:04 CEST End Time: 2020-06-13T04:56:40 CEST
Scanning dependencies of target xdrf
pgf90-Warning--Mipa is not supported for this target
[ 3%] [ 3%] Building C object source/lib/xdrf/CMakeFiles/xdrf.dir/ftocstr.c.o
Building C object source/lib/xdrf/CMakeFiles/xdrf.dir/libxdrf.c.o
PGF90-S-0038-Symbol, iargc, has not been explicitly declared (/.../source/source/unres-dock/generator.f)
0 inform, 0 warnings, 1 severes, 0 fatal for generator
Linking Fortran executable ../../bin/generator
pgf90-Warning--Mipa is not supported for this target
/usr/bin/ld: cannot find CMakeFiles/UNRES_DOCK_BIN.dir/generator.f.o: No such file or directory
[ 3%] Built target UNRES_DOCK_BIN
Linking C static library libxdrf.a
[ 3%] Built target xdrf
Scanning dependencies of target UNRES_CLUSTER_BIN
[ 4%] Building Fortran object source/cluster/unres/src/CMakeFiles/UNRES_CLUSTER_BIN.dir/arcos.f.o
Scanning dependencies of target UNRES_CLUSTER_WHAM_M_BIN
pgf90-Warning--Mipa is not supported for this target
[ 4%] Scanning dependencies of target UNRES_WHAM_M_BIN
Building Fortran object source/cluster/wham/src-HCD-5D/CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/arcos.f.o
/usr/bin/ld: cannot find CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/energy_p_new.F.o: No such file or directory
/usr/bin/ld: cannot find CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/parmread.F.o: No such file or directory
/usr/bin/ld: cannot find CMakeFiles/UNRES_CLUSTER_WHAM_M_BIN.dir/dfa.F.o: No such file or directory
[ 68%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/minim_mcmf.F.o
[ 68%] Built target UNRES_CLUSTER_WHAM_M_BIN
pgf90-Warning--Mipa is not supported for this target
[ 68%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/misc.f.o
pgf90-Warning--Mipa is not supported for this target
[ 69%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/moments.F.o
pgf90-Warning--Mipa is not supported for this target
/usr/bin/ld: cannot find CMakeFiles/UNRES_WHAM_M_BIN.dir/enecalc1.F.o: No such file or directory
[ 99%] [ 99%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/energy_p_new_barrier.F.o
/usr/bin/ld: cannot find CMakeFiles/UNRES_WHAM_M_BIN.dir/dfa.F.o: No such file or directory
Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/energy_p_new-sep_barrier.F.o
[ 99%] Built target UNRES_WHAM_M_BIN
pgf90-Warning--Mipa is not supported for this target
pgf90-Warning--Mipa is not supported for this target
[100%] Building Fortran object source/unres/src-HCD-5D/CMakeFiles/UNRES_BIN-MD-M.dir/gradient_p.F.o
pgf90-Warning--Mipa is not supported for this target
PGF90-S-0038-Symbol, isnan, has not been explicitly declared (/.../source/source/unres/src-HCD-5D/energy_p_new_barrier.F)