Site Name: dell15
Build Name: homology Linux-gfortan-MPI E0LL2Y (view notes)
Stamp: 20171123-2203-Nightly (related builds)
Time: 2017-11-24T03:25:13 CET
Type: Nightly

OS Name: Linux
OS Platform: x86_64
OS Release: 3.13.0-24-generic
OS Version: #47-Ubuntu SMP Fri May 2 23:30:00 UTC 2014
Compiler Version: unknown
CTest version: ctest-2.8.12.2

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Build050
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Stage: Update (0 errors, 0 warnings)

Start Time: 2017-11-24T03:25:01 CET
End Time: 2017-11-24T03:25:12 CET
Update Command: "/usr/bin/git" "fetch"
Update Type: GIT
Number of Updates: 0

Configure (0 errors, 0 warnings)

Start Time: 2017-11-24T03:25:12 CET
End Time: 2017-11-24T03:25:12 CET
Configure Command: /usr/bin/cmake -DCMAKE_BUILD_TYPE:STRING=Release -DCMAKE_Fortran_COMPILER=gfortran -DUNRES_MD_FF=E0LL2Y -DUNRES_CSA_FF=E0LL2Y -DUNRES_WITH_MPI=1 "-GUnix Makefiles" "/tmp/cdash/homology/source"
Configure Return Value: 0
Configure Output: 
-- The Fortran compiler identification is GNU
-- The C compiler identification is GNU 4.8.4
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran  -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
MPI found
Detected 64-bit architecture
-- Looking for include file pthread.h
-- Looking for include file pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/cdash/homology/build

View Configure Summary

Build (0 errors, 50 warnings)

Build command: /usr/bin/make -i -j4
Start Time: 2017-11-24T03:25:13 CET
End Time: 2017-11-24T03:26:01 CET

View Errors Summary


Build Warnings (50)
Build Log line 75


  File: /tmp/cdash/homology/build/Warning: DO loop at 
  Line: 1 
[ 13%] [ 13%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/cored.f.o
[ 13%] Building Fortran object source/unres/src_MIN/CMakeFiles/UNRES_MIN_BIN.dir/refsys.f.o
Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/blas.f.o
[ 13%] [ 13%] Building Fortran object source/unres/src_CSA/CMakeFiles/UNRES_BIN-CSA.dir/dfa.F.o
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/.../source/source/unres/src_CSA/dfa.F:1728.15:

       do i=1,0                                                         
               1

Warning: DO loop at (1) will be executed zero times

/.../source/source/unres/src_CSA/dfa.F:1077.26:

      call sheetforce(nca,wshet)                                        
                          1

Warning: Actual argument contains too few elements for dummy argument 'wshet' (360000/640000) at (1)

/.../source/source/unres/src_CSA/dfa.F:1016.20:

      common /sheca/     bx,by,bz                                       
                    1

Warning: Named COMMON block 'sheca' at (1) shall be of the same size as elsewhere (14400 vs 19200 bytes)

/.../source/source/unres/src_CSA/dfa.F:1017.19:

      common /shee/      vbeta,vbet,vbetp,vbetm                         
                   1

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/.../source/source/unres/src_CSA/dfa.F:1019.19:

      common /shef/      shefx, shefy, shefz                            
                   1

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/.../source/source/unres/src_CSA/dfa.F:1018.20:

      common /shetf/     shetfx,shetfy,shetfz                           
                    1

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[ 14%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/bond_move.f.o
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COMMON.CHAIN:24.18:
    Included at /.../source/source/unres/src_MD-M/chainbuild.F:313:
      common /afm/  forceAFMconst, distafminit,afmend,afmbeg,           
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/.../source/source/unres/src_MIN/energy_p_new_barrier.F:6687.28:

      common /przechowalnia/ zapas                                      
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      common /przechowalnia/ zapas                                      
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/.../source/source/unres/src_MD/initialize_p.F:299.28:

      common /przechowalnia/ iturn3_start_all(0:max_fg_procs),          
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/.../source/source/unres/src_MD/initialize_p.F: In function ‘init_int_table’:

Build Log line 170


  File: source/unres/src_MD/initialize_p.F
  Line: 677 
/.../source/source/unres/src_MD/initialize_p.F:677:0: warning: iteration 512 invokes undefined behavior [-Waggressive-loop-optimizations]

             ielstart_all(j,i)=0
 ^

Build Log line 173


  File: source/unres/src_MD/initialize_p.F
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/.../source/source/unres/src_MD/initialize_p.F:675:0: note: containing loop

         do i=0,maxprocs-1
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[ 23%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/fitsq.f.o
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[ 25%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/intlocal.f.o
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COMMON.LANGEVIN.lang0:6.23:
    Included at /.../source/source/unres/src_MD/lagrangian_lesyng.F:654:

      common /langforc/ friction,stochforc,                             
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/.../source/source/unres/src_MD-M/initialize_p.F: In function ‘init_int_table’:

Build Log line 211


  File: source/unres/src_MD-M/initialize_p.F
  Line: 746 
/.../source/source/unres/src_MD-M/initialize_p.F:746:0: warning: iteration 256 invokes undefined behavior [-Waggressive-loop-optimizations]

             ielstart_all(j,i)=0
 ^

Build Log line 214


  File: source/unres/src_MD-M/initialize_p.F
  Line: 744 
/.../source/source/unres/src_MD-M/initialize_p.F:744:0: note: containing loop

         do i=0,maxprocs-1
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/.../source/source/unres/src_CSA/initialize_p.F:296.28:

      common /przechowalnia/ iturn3_start_all(0:max_fg_procs),          
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      common /gucio/ cm,energia_short                                   
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/.../source/source/unres/src_MD/MD_A-MTS.F:1674.20:

      common /gucio/ cm                                                 
                    1

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/.../source/source/unres/src_MD/MD_A-MTS.F:35.20:

      common /gucio/ cm                                                 
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/.../source/source/unres/src_CSA/initialize_p.F: In function ‘init_int_table’:

Build Log line 247


  File: source/unres/src_CSA/initialize_p.F
  Line: 672 
/.../source/source/unres/src_CSA/initialize_p.F:672:0: warning: iteration 512 invokes undefined behavior [-Waggressive-loop-optimizations]

             ielstart_all(j,i)=0
 ^

Build Log line 250


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         do i=0,maxprocs-1
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      common /langforc/ friction,stochforc,                             
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       common /przechowalnia/ d_restart1,d_restart2                     
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/.../source/source/unres/src_MD-M/MREMD.F:1740.28:

      common /przechowalnia/ d_restart1                                 
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      common /przechowalnia/ d_restart1                                 
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/.../source/source/unres/src_MD/stochfric.F:349.28:

      common /przechowalnia/ ginvfric,Ghalf,fcopy                       
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/.../source/source/unres/src_MD/stochfric.F:346.20:

      common /syfek/ gamvec                                             
                    1

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[ 54%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/ssMD.F.o
COMMON.CHAIN:24.18:
    Included at /.../source/source/unres/src_MD-M/readrtns_CSA.F:2600:

      common /afm/  forceAFMconst, distafminit,afmend,afmbeg,           
                  1

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/.../source/source/unres/src_MD/energy_p_new_barrier.F:7251.28:
      common /przechowalnia/ zapas                                      
                            1

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[ 56%] Built target UNRES_BIN-CSA
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[ 56%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/wham_multparm.F.o
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/.../source/source/wham/src/conf_compar.F:349.24:

            write(istat,'(1x,$,20(i3,$))')                              
                        1

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/.../source/source/wham/src/conf_compar.F:352.25:

              write(istat,'(1x,$,20(f5.1,f5.2$))')                      
                         1

Warning: $ should be the last specifier in format at (1)

/.../source/source/wham/src/conf_compar.F:355.25:

              write(istat,'(1x,$,20(f5.1$))')                           
                         1

Warning: $ should be the last specifier in format at (1)

/.../source/source/wham/src/conf_compar.F:358.24:

            write(istat,'(1x,$,20(i1,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/.../source/source/wham/src/conf_compar.F:364.27:

              write (istat,'(100(i1,$))')(iclass(k,j),                  
                           1

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/.../source/source/unres/src_MD-M/stochfric.F:349.28:

      common /przechowalnia/ ginvfric,Ghalf,fcopy                       
                            1

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/.../source/source/unres/src_MD-M/stochfric.F:346.20:

      common /syfek/ gamvec                                             
                    1

Warning: Named COMMON block 'syfek' at (1) shall be of the same size as elsewhere (16000 vs 48000 bytes)

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[ 62%] Building Fortran object source/wham/src/CMakeFiles/UNRES_WHAM_BIN.dir/rmscalc.f.o
Build Log line 525


  File: /tmp/cdash/homology/build/Warning: DO loop at 
  Line: 1 
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/.../source/source/wham/src/dfa.F:1728.15:

       do i=1,0                                                         
               1

Warning: DO loop at (1) will be executed zero times

[ 64%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/together.F.o
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Linking Fortran executable ../../../bin/wham_gfortran_MPI_E0LL2Y.exe
[ 64%] Building Fortran object source/unres/src_MD/CMakeFiles/UNRES_BIN-MD.dir/cinfo.f.o
Linking Fortran executable ../../../bin/unresMD_gfortran_MPI_E0LL2Y.exe
[ 64%] Building Fortran object source/unres/src_MD-M/CMakeFiles/UNRES_BIN-MD-M.dir/energy_p_new_barrier.F.o
[ 64%] Built target UNRES_BIN-MD
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/.../source/source/unres/src_MD-M/energy_p_new_barrier.F:8081.28:

      common /przechowalnia/ zapas                                      
                            1

Warning: Named COMMON block 'przechowalnia' at (1) shall be of the same size as elsewhere (143360000 vs 53248000 bytes)

[ 65%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/openunits.F.o
[ 65%] Built target UNRES_WHAM_BIN
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/.../source/source/cluster/wham/src-M/energy_p_new.F:9336.37:

     &        (sh_frac_dist_grad(j)*-2.0d0                              
                                     1

Warning: Extension: Unary operator following arithmetic operator (use parentheses) at (1)

/.../source/source/cluster/wham/src-M/energy_p_new.F:9504.37:

     &        (sh_frac_dist_grad(j)*-2.0d0                              
                                     1

Warning: Extension: Unary operator following arithmetic operator (use parentheses) at (1)

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Linking Fortran executable ../../../bin/unresMD-mult_gfortran_MPI_E0LL2Y.exe
[ 73%] Built target UNRES_BIN-MD-M
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/.../source/source/cluster/wham/src/geomout.F:167.40:

  180 format (I5,2F12.3,I2,$,8(1X,2I3,$))                               
                                        1

Warning: $ should be the last specifier in format at (1)

/.../source/source/cluster/wham/src/geomout.F:168.29:

  190 format (3X,11(1X,2I3,$))                                          
                             1

Warning: $ should be the last specifier in format at (1)

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[ 75%] Building Fortran object source/cluster/wham/src/CMakeFiles/UNRES_CLUSTER_WHAM_BIN.dir/icant.f.o
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[ 76%] Building Fortran object source/wham/src-M/CMakeFiles/UNRES_WHAM_M_BIN.dir/conf_compar.F.o
/.../source/source/wham/src-M/conf_compar.F:370.24:

            write(istat,'(1x,$,20(i3,$))')                              
                        1

Warning: $ should be the last specifier in format at (1)

/.../source/source/wham/src-M/conf_compar.F:373.25:

              write(istat,'(1x,$,20(f5.1,f5.2$))')                      
                         1

Warning: $ should be the last specifier in format at (1)

/.../source/source/wham/src-M/conf_compar.F:376.25:

              write(istat,'(1x,$,20(f5.1$))')                           
                         1

Warning: $ should be the last specifier in format at (1)

/.../source/source/wham/src-M/conf_compar.F:379.24:

            write(istat,'(1x,$,20(i1,$))')                              
                        1
Warning: $ should be the last specifier in format at (1)
/.../source/source/wham/src-M/conf_compar.F:385.27:

              write (istat,'(100(i1,$))')(iclass(k,j),                  
                           1
Warning: $ should be the last specifier in format at (1)
The maximum number of reported warnings or errors has been reached!!!


View Warnings Summary


Test (36  passed, 9 failed, 0 not run)
 
View Tests Summary